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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_5018 and Psyr_5019 are separated by 179 nucleotides
Psyr_5019 and Psyr_5020 are separated by 320 nucleotides
Psyr_5020 and Psyr_5021 are separated by 311 nucleotides
Psyr_5021 and Psyr_5022 are separated by 86 nucleotides
Psyr_5018: Psyr_5018 - NAD(P) transhydrogenase, beta subunit, at 5,959,131 to 5,960,585
_5018
Psyr_5019: Psyr_5019 - Acetyl-CoA hydrolase, at 5,960,765 to 5,962,258
_5019
Psyr_5020: Psyr_5020 - conserved hypothetical protein, at 5,962,579 to 5,962,794
_5020
Psyr_5021: Psyr_5021 - conserved hypothetical protein, at 5,963,106 to 5,963,423
_5021
Psyr_5022: Psyr_5022 - conserved hypothetical protein, at 5,963,510 to 5,963,815
_5022
Group
Condition
Psyr
_5018
Psyr
_5019
Psyr
_5020
Psyr
_5021
Psyr
_5022
stress
KB with Totarol 10 mM
-0.2
-0.0
N.D.
N.D.
-0.4
stress
KB with Paclitaxel 10 mM
-0.1
-0.0
N.D.
N.D.
-0.5
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.1
N.D.
N.D.
-0.1
stress
KB with L-alliin 10 mM
+0.2
-0.0
N.D.
N.D.
-0.5
stress
KB with 4-hydroxychalcone 10 mM
+0.1
-0.0
N.D.
N.D.
-0.4
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.1
N.D.
N.D.
+0.1
stress
KB with Levodopa 10 mM
+0.1
-0.0
N.D.
N.D.
-0.4
kb
KB
+0.2
-0.0
N.D.
N.D.
-0.4
stress
KB with Palmatine chloride 10 mM
+0.1
+0.0
N.D.
N.D.
-0.3
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.1
+0.1
N.D.
N.D.
+0.3
stress
KB with Erythromycin 6.25 ug/ml
+0.4
+0.1
N.D.
N.D.
-0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.3
+0.2
N.D.
N.D.
-0.2
stress
KB with Mitomycin C 0.05 ug/ml
-0.0
+0.1
N.D.
N.D.
+0.4
in planta
epiphytic; Lima bean
+0.3
+0.2
N.D.
N.D.
-0.0
stress
KB with Quercetin 360 ug/ml
+0.0
+0.1
N.D.
N.D.
+0.4
stress
KB with Rotenone 0.125 mg/ml
+0.3
+0.2
N.D.
N.D.
+0.0
stress
KB with Berberine 15.6 ug/ml
+0.2
+0.1
N.D.
N.D.
+0.3
stress
KB with Rifampicin 0.1 mg/ml
+0.3
+0.2
N.D.
N.D.
+0.1
stress
KB with Nitrofurantoin 0.0625 mg/ml
+0.3
+0.2
N.D.
N.D.
+0.1
stress
KB with Dimethyl Sulfoxide 0.42 vol%
+0.3
+0.1
N.D.
N.D.
+0.1
stress
KB with Piperacillin 0.775 ug/ml
+0.3
+0.1
N.D.
N.D.
+0.3
stress
KB with Flavone 0.125 mg/ml
+0.1
+0.3
N.D.
N.D.
+0.2
kb
KB
+0.3
+0.1
N.D.
N.D.
+0.2
stress
KB with capsaicin 0.25 mg/ml
+0.2
+0.2
N.D.
N.D.
+0.2
kb
KB
+0.2
+0.3
N.D.
N.D.
+0.3
stress
KB with Phloretin 125 ug/ml
+0.2
+0.1
N.D.
N.D.
+0.4
in planta
epiphytic; Lima bean
+0.5
+0.0
N.D.
N.D.
+0.3
stress
KB with Carbenicillin 3.1 ug/ml
+0.5
+0.3
N.D.
N.D.
+0.2
in planta
Green bean; epiphytic
+0.4
+0.1
N.D.
N.D.
+0.5
in planta
Green bean; epiphytic
+0.5
+0.1
N.D.
N.D.
+0.6
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