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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4990 and Psyr_4991 are separated by 7 nucleotides
Psyr_4991 and Psyr_4992 are separated by 439 nucleotides
Psyr_4992 and Psyr_4993 are separated by 9 nucleotides
Psyr_4993 and Psyr_4994 are separated by 213 nucleotides
Psyr_4990: Psyr_4990 - YD repeat protein, at 5,918,400 to 5,921,003
_4990
Psyr_4991: Psyr_4991 - hypothetical protein, at 5,921,011 to 5,921,331
_4991
Psyr_4992: Psyr_4992 - YD repeat protein, at 5,921,771 to 5,923,126
_4992
Psyr_4993: Psyr_4993 - hypothetical protein, at 5,923,136 to 5,923,936
_4993
Psyr_4994: Psyr_4994 - rhs-related protein, at 5,924,150 to 5,924,563
_4994
Group
Condition
Psyr
_4990
Psyr
_4991
Psyr
_4992
Psyr
_4993
Psyr
_4994
stress
KB with Avocadene 10 mM
-0.0
-4.9
-0.1
-0.4
N.D.
stress
KB with Palmatine chloride 10 mM
+0.0
-4.1
-0.1
-0.6
N.D.
stress
KB with Piperine 10 mM
+0.0
-3.4
-0.5
-0.5
N.D.
stress
KB with Paclitaxel 10 mM
+0.1
-2.8
-0.7
-0.6
N.D.
stress
KB with Cantharidin 10 mM
-0.1
-3.6
-0.0
-0.2
N.D.
stress
KB with Avocatin A 10 mM
+0.0
-2.9
-0.5
-0.5
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.1
-2.5
-0.5
-0.4
N.D.
stress
KB with Novobiocin 7.75 ug/ml
+0.0
-2.7
-0.3
-0.4
N.D.
stress
KB with Auraptene 10 mM
+0.2
-3.3
-0.0
-0.3
N.D.
stress
KB with Cotarnine Chloride 10 mM
-0.1
-2.7
-0.1
-0.3
N.D.
stress
KB with Chrysophanol 10 mM
+0.0
-2.5
-0.2
-0.4
N.D.
stress
KB with Levodopa 10 mM
-0.1
-2.3
-0.1
-0.6
N.D.
stress
KB with Harmol Hydrochloride 10 mM
-0.1
-2.3
-0.2
-0.4
N.D.
stress
KB with Sclareolide 10 mM
+0.1
-2.7
+0.0
-0.4
N.D.
in planta
apoplastic, chopping recovery; Green bean
+0.2
-2.8
-0.4
+0.2
N.D.
stress
KB with Strychnine Sulfate 10 mM
-0.0
-2.2
-0.2
-0.3
N.D.
stress
KB with Tetracycline 0.0015 ug/ml
+0.0
-2.5
+0.0
-0.3
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.0
-2.3
-0.0
-0.4
N.D.
stress
KB with Oxonitine 10 mM
-0.1
-2.1
-0.0
-0.4
N.D.
in planta
apoplastic; Green bean; 6 days
-0.0
-2.3
-0.4
+0.1
N.D.
in planta
apoplastic, chopping recovery; Green bean
+0.0
-2.5
-0.2
+0.0
N.D.
stress
KB with Solanesol 10 mM
+0.0
-2.0
-0.2
-0.4
N.D.
stress
KB with D-Salicin 240 ug/ml
+0.0
-2.4
-0.2
-0.1
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
-2.6
+0.0
-0.0
N.D.
in planta
apoplastic, chopping recovery; Green bean
+0.1
-2.4
-0.2
+0.0
N.D.
stress
KB with Palmatine 10 mM
-0.0
-1.7
-0.3
-0.4
N.D.
stress
KB with Chaulmoogric 10 mM
+0.1
-2.0
-0.2
-0.3
N.D.
stress
KB with Veratrine 10 mM
+0.0
-1.5
-0.3
-0.7
N.D.
stress
KB with Emodin 10 mM
+0.0
-1.7
-0.2
-0.5
N.D.
stress
KB with Harmol 10 mM
+0.1
-2.1
-0.1
-0.3
N.D.
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