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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4986 and Psyr_4987 are separated by 6 nucleotides
Psyr_4987 and Psyr_4988 are separated by 162 nucleotides
Psyr_4988 and Psyr_4989 overlap by 13 nucleotides
Psyr_4989 and Psyr_4990 are separated by 246 nucleotides
Psyr_4986: Psyr_4986 - YD repeat protein, at 5,911,246 to 5,915,475
_4986
Psyr_4987: Psyr_4987 - conserved hypothetical protein, at 5,915,482 to 5,916,090
_4987
Psyr_4988: Psyr_4988 - YD repeat protein, at 5,916,253 to 5,917,695
_4988
Psyr_4989: Psyr_4989 - hypothetical protein, at 5,917,683 to 5,918,153
_4989
Psyr_4990: Psyr_4990 - YD repeat protein, at 5,918,400 to 5,921,003
_4990
Group
Condition
Psyr
_4986
Psyr
_4987
Psyr
_4988
Psyr
_4989
Psyr
_4990
stress
KB with Acridine orange 3.125 ug/ml
+0.1
N.D.
-0.3
-1.6
-0.2
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.1
N.D.
-0.1
-1.3
-0.1
stress
KB with Mitomycin C 0.05 ug/ml
-0.0
N.D.
-0.1
-0.6
-0.5
stress
KB with Carbenicillin 3.1 ug/ml
-0.0
N.D.
-0.5
-0.7
-0.1
stress
KB with Phloretin 125 ug/ml
-0.2
N.D.
-0.2
-0.6
-0.0
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.0
N.D.
-0.2
-0.8
+0.1
stress
KB with Acriflavine 1.25 ug/ml
-0.1
N.D.
-0.2
-0.3
-0.1
stress
KB with Novobiocin 7.75 ug/ml
+0.0
N.D.
-0.1
-0.7
+0.0
stress
KB with Harmine 10 mM
-0.0
N.D.
-0.3
-0.3
-0.1
stress
KB with Escin 10 mM
+0.0
N.D.
-0.1
-0.5
-0.2
stress
KB with Piperine 10 mM
+0.1
N.D.
-0.3
-0.5
+0.0
stress
KB with Isosafrole 10 mM
+0.1
N.D.
-0.1
-0.5
-0.1
stress
KB with Veratrine 10 mM
+0.0
N.D.
-0.3
-0.4
+0.0
stress
KB with 4-hydroxychalcone 10 mM
+0.0
N.D.
-0.3
-0.3
+0.1
stress
KB with Harmol 10 mM
+0.1
N.D.
-0.5
-0.3
+0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
N.D.
-0.3
-0.3
+0.0
stress
KB with Diallyl sulfide 10 mM
+0.2
N.D.
-0.2
-0.6
+0.1
stress
KB with Auraptene 10 mM
-0.0
N.D.
-0.2
-0.4
+0.2
stress
KB with Lupeol 10 mM
+0.1
N.D.
-0.4
-0.1
+0.1
stress
KB with Cantharidin 10 mM
+0.0
N.D.
+0.3
-0.5
-0.1
stress
KB with Terpene 10 mM
+0.0
N.D.
-0.4
+0.0
+0.2
stress
KB with Anethole 10 mM
+0.2
N.D.
-0.2
-0.2
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.1
N.D.
+0.3
-0.6
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.1
N.D.
+0.1
-0.4
+0.2
stress
KB with capsaicin 0.25 mg/ml
+0.1
N.D.
+0.2
-0.5
+0.2
stress
KB with Totarol 10 mM
+0.2
N.D.
-0.2
+0.1
+0.1
in planta
epiphytic; Lima bean
+0.3
N.D.
-0.1
+0.3
+0.0
in planta
Green bean; epiphytic
+0.1
N.D.
+0.4
+0.2
+0.0
in planta
Green bean; epiphytic
+0.1
N.D.
+0.4
+0.3
+0.1
in planta
epiphytic; Lima bean
+0.3
N.D.
+0.1
+0.6
+0.0
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