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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4971 and Psyr_4972 are separated by 99 nucleotides
Psyr_4972 and Psyr_4973 are separated by 63 nucleotides
Psyr_4973 and Psyr_4974 are separated by 33 nucleotides
Psyr_4974 and Psyr_4975 are separated by 140 nucleotides
Psyr_4971: Psyr_4971 - Sel1-like repeat protein, at 5,895,050 to 5,896,006
_4971
Psyr_4972: Psyr_4972 - Sel1-like repeat protein, at 5,896,106 to 5,897,137
_4972
Psyr_4973: Psyr_4973 - hypothetical protein, at 5,897,201 to 5,898,283
_4973
Psyr_4974: Psyr_4974 - Rhs element Vgr protein, at 5,898,317 to 5,901,193
_4974
Psyr_4975: Psyr_4975 - hypothetical protein, at 5,901,334 to 5,902,053
_4975
Group
Condition
Psyr
_4971
Psyr
_4972
Psyr
_4973
Psyr
_4974
Psyr
_4975
stress
KB with Carbenicillin 3.1 ug/ml
-0.6
-1.5
-0.1
-0.2
-0.7
stress
KB with Mitomycin C 0.05 ug/ml
-0.6
-0.8
-0.0
-0.1
-0.4
stress
KB with Phloretin 125 ug/ml
-0.4
-0.5
-0.2
-0.0
-0.2
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.2
-0.4
-0.3
-0.2
-0.4
stress
KB with Harmine 10 mM
-0.5
-0.5
+0.1
-0.0
-0.3
stress
KB with Acriflavine 1.25 ug/ml
-0.5
-0.4
+0.0
-0.2
-0.1
stress
KB with Escin 10 mM
-0.7
-0.5
+0.3
-0.0
-0.1
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.4
-0.5
+0.0
-0.0
-0.2
stress
KB with Piperacillin 0.775 ug/ml
-0.4
-0.3
-0.1
-0.1
-0.1
stress
KB with Erythromycin 6.25 ug/ml
-0.4
-0.3
+0.0
-0.0
-0.1
stress
KB with Oxedrine 10 mM
-0.1
-0.5
+0.0
+0.0
-0.2
stress
KB with Harmol 10 mM
+0.1
-0.3
-0.1
-0.1
-0.2
stress
KB with Palmatine chloride 10 mM
+0.1
-0.2
-0.3
+0.0
+0.0
stress
KB with Usnic Acid 10 mM
-0.1
-0.4
+0.2
-0.0
-0.1
stress
KB with Avocadyne 10 mM
-0.1
-0.5
+0.2
+0.1
-0.1
stress
KB with Levodopa 10 mM
+0.2
-0.4
+0.0
-0.0
-0.1
stress
KB with Totarol 10 mM
-0.0
-0.5
+0.2
-0.1
+0.1
in planta
Green bean; epiphytic
-0.6
-0.0
+0.2
+0.2
+0.2
stress
KB with Harmol Hydrochloride 10 mM
-0.2
-0.1
+0.2
+0.1
-0.1
stress
KB with Palmatine 10 mM
+0.3
-0.5
+0.2
+0.0
-0.0
stress
KB with Curcumin 10 mM
+0.2
-0.2
+0.2
-0.1
-0.1
in planta
Green bean; epiphytic
-0.3
-0.1
+0.2
+0.2
+0.1
in planta
apoplastic; Green bean; 6 days
+0.3
-0.1
-0.2
+0.1
-0.0
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
-0.3
+0.3
+0.0
+0.1
stress
KB with Paclitaxel 10 mM
+0.3
-0.3
+0.3
+0.0
-0.1
stress
KB with Chrysophanol 10 mM
+0.3
-0.3
+0.2
+0.0
-0.0
stress
KB with Piperine 10 mM
+0.3
-0.3
+0.3
+0.1
-0.1
stress
KB with Terpene 10 mM
+0.2
-0.3
+0.3
+0.0
+0.1
stress
KB with Diallyl sulfide 10 mM
+0.3
-0.3
+0.2
+0.0
+0.1
in planta
epiphytic; Lima bean
+0.4
+0.1
+0.1
+0.2
+0.1
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