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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4960 and Psyr_4961 overlap by 4 nucleotides
Psyr_4961 and Psyr_4962 are separated by 30 nucleotides
Psyr_4962 and Psyr_4963 are separated by 31 nucleotides
Psyr_4963 and Psyr_4964 overlap by 4 nucleotides
Psyr_4960: Psyr_4960 - protein of unknown function DUF876, at 5,880,121 to 5,881,464
_4960
Psyr_4961: Psyr_4961 - conserved hypothetical protein, at 5,881,461 to 5,882,174
_4961
Psyr_4962: Psyr_4962 - ImcF-related:Protein of unknown function DUF1215, at 5,882,205 to 5,886,137
_4962
Psyr_4963: Psyr_4963 - hypothetical protein, at 5,886,169 to 5,887,092
_4963
Psyr_4964: Psyr_4964 - OmpA/MotB, at 5,887,089 to 5,889,581
_4964
Group
Condition
Psyr
_4960
Psyr
_4961
Psyr
_4962
Psyr
_4963
Psyr
_4964
stress
KB with Acriflavine 1.25 ug/ml
-0.1
-0.3
-0.2
-0.4
+0.1
in planta
epiphytic; Lima bean
-0.1
-0.6
-0.0
-0.0
-0.0
stress
KB with Anethole 10 mM
+0.1
-0.1
-0.0
-0.6
-0.1
stress
KB with Palmatine 10 mM
-0.1
-0.2
+0.1
-0.4
-0.1
stress
KB with Carbenicillin 3.1 ug/ml
-0.2
-0.3
+0.1
-0.6
+0.3
stress
KB with Veratrine 10 mM
+0.2
-0.5
+0.0
-0.4
+0.0
in planta
epiphytic; Lima bean
+0.1
-0.6
-0.0
-0.2
+0.1
stress
KB with Nonanoic 10 mM
-0.1
-0.1
+0.1
-0.5
+0.2
stress
KB with Erythromycin 6.25 ug/ml
+0.0
-0.2
+0.1
-0.4
-0.1
in planta
apoplastic, chopping recovery; Green bean
+0.2
-0.2
-0.0
-0.2
-0.2
stress
KB with Mitomycin C 0.05 ug/ml
-0.1
-0.4
+0.2
-0.3
+0.1
stress
KB with Avocatin A 10 mM
+0.2
-0.2
+0.0
-0.3
-0.0
stress
KB with 4-acetoxyphenol 10 mM
-0.0
-0.2
+0.1
-0.3
+0.1
stress
KB with Nitrofurantoin 31.25 ug/ml
+0.2
-0.4
-0.0
-0.1
+0.0
in planta
apoplastic, chopping recovery; Green bean
+0.2
-0.0
+0.0
-0.4
-0.1
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.1
-0.0
-0.4
-0.1
stress
KB with Anabasine Hydrochloride 10 mM
-0.1
-0.5
-0.0
+0.3
-0.1
in planta
Green bean; epiphytic
+0.3
-0.4
-0.0
-0.1
+0.0
stress
KB with 4-hydroxychalcone 10 mM
+0.1
-0.1
+0.1
-0.4
+0.1
stress
KB with Curcumin 10 mM
+0.2
-0.3
+0.2
-0.3
+0.0
stress
KB with L-alliin 10 mM
+0.1
+0.1
+0.1
-0.4
-0.0
stress
KB with Harmol 10 mM
+0.2
-0.3
+0.2
-0.4
+0.1
in planta
apoplastic; Green bean; 6 days
+0.2
+0.2
-0.2
-0.2
-0.1
stress
KB with Escin 10 mM
-0.1
-0.0
-0.0
+0.4
-0.1
stress
KB with Quercetin 360 ug/ml
+0.1
+0.1
+0.1
-0.3
+0.2
stress
KB with Piperic 10 mM
+0.2
-0.2
+0.2
+0.2
-0.1
stress
KB with capsaicin 0.25 mg/ml
+0.0
-0.2
+0.0
+0.2
+0.2
stress
KB with Rotenone 0.125 mg/ml
+0.0
+0.1
+0.1
+0.4
+0.1
stress
KB with Nitrofurantoin 0.0625 mg/ml
+0.1
+0.2
+0.1
+0.4
+0.2
stress
KB with Novobiocin 7.75 ug/ml
+0.2
+0.4
+0.3
+0.3
+0.1
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