Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a ΔmexB

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Top 30 experiments (either direction), sorted by average fitness

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500 ntPsyr_4917 and Psyr_RNA77 are separated by 758 nucleotidesPsyr_RNA77 and Psyr_4918 are separated by 580 nucleotidesPsyr_4918 and Psyr_4919 are separated by 1352 nucleotidesPsyr_4919 and Psyr_4920 are separated by 117 nucleotides Psyr_4917: Psyr_4917 - Heat shock protein DnaJ, N-terminal, at 5,828,952 to 5,829,977 _4917 Psyr_RNA77: Psyr_RNA77 - tRNA-Thr, at 5,830,736 to 5,830,811 _RNA77 Psyr_4918: Psyr_4918 - hypothetical protein, at 5,831,392 to 5,831,862 _4918 Psyr_4919: Psyr_4919 - type III effector protein AvrPto1, at 5,833,215 to 5,833,706 _4919 Psyr_4920: Psyr_4920 - conserved hypothetical bacteriophage protein, at 5,833,824 to 5,834,417 _4920
Group Condition Psyr_4917 Psyr_RNA77 Psyr_4918 Psyr_4919 Psyr_4920
in planta apoplastic; Green bean; 6 days -0.2 N.D. -0.1 -0.5 -1.0
in planta apoplastic; Green bean; 6 days +0.0 N.D. +0.0 -0.6 -0.8
stress KB with Erythromycin 6.25 ug/ml -0.1 N.D. +0.1 -0.1 -1.1
stress KB with Escin 10 mM -0.1 N.D. -0.1 -0.2 -0.8
in planta epiphytic; Lima bean +0.0 N.D. -0.2 -0.5 -0.4
stress KB with Harmine 10 mM -0.1 N.D. -0.0 -0.3 -0.7
stress KB with Acridine orange 3.125 ug/ml +0.1 N.D. -0.3 +0.2 -1.0
in planta apoplastic, chopping recovery; Green bean +0.1 N.D. -0.6 -0.9 +0.4
in planta apoplastic, chopping recovery; Green bean +0.1 N.D. -0.5 -0.9 +0.4
stress KB with Benzalkonium chloride 1.55 ug/ml +0.0 N.D. +0.2 -0.0 -1.1
in planta apoplastic, chopping recovery; Green bean +0.0 N.D. -0.5 -0.6 +0.3
stress KB with Piperic 10 mM +0.2 N.D. -0.2 -0.1 -0.5
stress KB with Oxedrine 10 mM +0.2 N.D. +0.1 -0.2 -0.6
in planta Green bean; epiphytic -0.2 N.D. +0.2 -0.2 -0.4
stress KB with Harmol 10 mM +0.2 N.D. +0.1 -0.2 -0.5
in planta Green bean; epiphytic -0.2 N.D. +0.3 -0.3 -0.3
in planta apoplastic, chopping recovery; Green bean +0.3 N.D. -0.2 -0.6 +0.2
stress KB with capsaicin 0.25 mg/ml -0.1 N.D. -0.4 +0.0 +0.5
stress KB with Flavone 0.125 mg/ml -0.1 N.D. -0.5 +0.0 +0.6
in planta epiphytic; Lima bean -0.1 N.D. -0.2 -0.3 +0.7
stress KB with Solanesol 10 mM +0.2 N.D. -0.4 +0.0 +0.4
stress KB with Dimethyl Sulfoxide 0.42 vol% +0.1 N.D. -0.3 +0.0 +0.5
stress KB with Totarol 10 mM +0.0 N.D. -0.0 -0.3 +0.7
stress KB with Chaulmoogric 10 mM +0.1 N.D. +0.4 -0.2 +0.4
stress KB with Sinomenine 10 mM -0.1 N.D. -0.0 -0.2 +1.1
stress KB with Usnic Acid 10 mM -0.1 N.D. +0.1 +0.1 +0.7
stress KB with Quercetin 360 ug/ml -0.1 N.D. +0.0 +0.2 +0.7
stress KB with Avocadyne 10 mM +0.1 N.D. -0.1 -0.1 +0.9
stress KB with Prenyletin 10 mM +0.1 N.D. +0.4 -0.2 +0.7
stress KB with Auraptene 10 mM +0.2 N.D. +0.1 +0.1 +0.7
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