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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4817 and Psyr_4818 are separated by 163 nucleotides
Psyr_4818 and Psyr_4819 are separated by 32 nucleotides
Psyr_4819 and Psyr_4820 overlap by 4 nucleotides
Psyr_4820 and Psyr_4821 are separated by 282 nucleotides
Psyr_4817: Psyr_4817 - L-glutamine synthetase, at 5,714,118 to 5,715,524
_4817
Psyr_4818: Psyr_4818 - chorismate mutase, at 5,715,688 to 5,716,245
_4818
Psyr_4819: Psyr_4819 - conserved hypothetical protein, at 5,716,278 to 5,716,859
_4819
Psyr_4820: Psyr_4820 - conserved hypothetical protein, at 5,716,856 to 5,717,488
_4820
Psyr_4821: Psyr_4821 - PAS/PAC sensor signal transduction histidine kinase, at 5,717,771 to 5,718,856
_4821
Group
Condition
Psyr
_4817
Psyr
_4818
Psyr
_4819
Psyr
_4820
Psyr
_4821
stress
KB with Erythromycin 6.25 ug/ml
N.D.
-0.9
-2.8
+0.1
-1.0
stress
KB with Acriflavine 1.25 ug/ml
N.D.
-1.4
-1.0
-0.1
-0.3
stress
KB with Harmine 10 mM
N.D.
-0.4
-1.2
+0.1
-0.7
stress
KB with Berberine 15.6 ug/ml
N.D.
-0.1
-1.8
-0.0
-0.2
in planta
epiphytic; Lima bean
N.D.
+0.3
-0.1
-0.3
-2.1
stress
KB with Benzalkonium chloride 1.55 ug/ml
N.D.
+0.0
-1.7
-0.5
+0.1
stress
KB with Mitomycin C 0.05 ug/ml
N.D.
-2.4
+0.0
+0.5
-0.1
stress
KB with Palmatine chloride 10 mM
N.D.
-0.9
-1.5
+0.1
+0.3
stress
KB with Usnic Acid 10 mM
N.D.
-1.2
-0.1
-0.0
-0.5
in planta
apoplastic; Green bean; 6 days
N.D.
-1.1
-0.0
+0.1
-0.6
stress
KB with Isosafrole 10 mM
N.D.
+0.0
-0.2
-0.1
-1.4
stress
KB with Cantharidin 10 mM
N.D.
-0.7
-0.2
+0.0
-0.7
stress
KB with Cotarnine Chloride 10 mM
N.D.
-0.8
-0.2
-0.0
-0.5
stress
KB with Methanol 5 vol%
N.D.
-0.7
-0.1
-0.2
-0.4
stress
KB with Harmol Hydrochloride 10 mM
N.D.
-0.3
-0.6
-0.0
-0.4
stress
KB with Acridine orange 3.125 ug/ml
N.D.
-0.6
-0.5
+0.2
-0.5
stress
KB with Oxedrine 10 mM
N.D.
-1.1
-0.0
+0.2
-0.3
stress
KB with Palmatine 10 mM
N.D.
+0.6
-1.5
-0.1
-0.1
stress
KB with Piperine 10 mM
N.D.
-1.3
-0.1
-0.0
+0.6
in planta
epiphytic; Lima bean
N.D.
+0.7
-0.1
+0.2
-1.6
stress
KB with Gossypetin 10 mM
N.D.
-0.8
-0.2
-0.0
+0.4
in planta
Green bean; epiphytic
N.D.
+0.9
+0.1
-0.0
-1.5
in planta
apoplastic, chopping recovery; Green bean
N.D.
-1.0
+0.0
-0.2
+0.7
stress
KB with Levodopa 10 mM
N.D.
-0.9
+0.2
+0.2
+0.2
in planta
Green bean; epiphytic
N.D.
+0.9
+0.0
+0.1
-1.3
stress
KB with capsaicin 0.25 mg/ml
N.D.
+0.7
-0.1
-0.0
-0.6
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
-0.3
-0.4
+0.3
+0.5
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.4
+0.0
-0.2
+0.9
stress
KB with Rotenone 0.25 mg/ml
N.D.
+1.3
-0.1
+0.0
-0.2
stress
KB with Rotenone 0.125 mg/ml
N.D.
+1.2
-0.0
+0.1
-0.0
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