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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4808 and Psyr_4809 are separated by 202 nucleotides
Psyr_4809 and Psyr_4810 are separated by 278 nucleotides
Psyr_4810 and Psyr_4811 are separated by 0 nucleotides
Psyr_4811 and Psyr_4812 are separated by 234 nucleotides
Psyr_4808: Psyr_4808 - conserved hypothetical protein, at 5,703,663 to 5,703,926
_4808
Psyr_4809: Psyr_4809 - conserved hypothetical protein, at 5,704,129 to 5,704,458
_4809
Psyr_4810: Psyr_4810 - sodium/proton antiporter, CPA1 family, at 5,704,737 to 5,705,996
_4810
Psyr_4811: Psyr_4811 - transcriptional regulator, AraC family, at 5,705,997 to 5,706,944
_4811
Psyr_4812: Psyr_4812 - sorbitol-binding protein / mannitol-binding protein, at 5,707,179 to 5,708,495
_4812
Group
Condition
Psyr
_4808
Psyr
_4809
Psyr
_4810
Psyr
_4811
Psyr
_4812
in planta
epiphytic; Lima bean
-4.9
-0.2
+0.6
-0.2
-0.0
kb
KB
-1.6
-0.3
-0.3
-0.4
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-1.5
-0.2
-0.5
-0.2
+0.0
in planta
apoplastic, chopping recovery; Green bean
-1.8
+0.2
-0.2
-0.4
-0.0
stress
KB with Rotenone 0.25 mg/ml
-1.0
-0.1
-0.6
-0.3
+0.0
stress
KB with capsaicin 0.125 mg/ml
-1.1
-0.1
-0.3
-0.2
+0.0
in planta
apoplastic, chopping recovery; Green bean
-1.5
-0.0
+0.1
-0.2
+0.0
stress
KB with Benzalkonium chloride 1.55 ug/ml
-1.5
+0.0
+0.4
-0.2
-0.1
stress
KB with capsaicin 0.25 mg/ml
-0.8
-0.1
-0.3
-0.1
+0.1
stress
KB with Avocadyne 10 mM
-1.1
-0.2
+0.1
-0.0
-0.0
in planta
Green bean; epiphytic
-1.0
+0.0
-0.2
+0.1
+0.1
stress
KB with Nitrofurantoin 0.0625 mg/ml
-0.7
+0.2
-0.3
-0.1
+0.0
stress
KB with Piperine 10 mM
-1.1
+0.2
+0.2
+0.4
+0.0
stress
KB with Phloretin 125 ug/ml
-0.8
+0.3
+0.3
-0.0
-0.0
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
-0.5
-0.1
+0.5
-0.1
-0.1
stress
KB with Solanesol 10 mM
-0.5
-0.1
+0.5
-0.2
+0.2
stress
KB with Nonanoic 10 mM
-0.5
+0.2
+0.4
+0.1
+0.0
stress
KB with Acridine orange 3.125 ug/ml
-0.2
+0.4
+0.3
-0.3
+0.2
stress
KB with Mitomycin C 0.05 ug/ml
-0.2
+0.4
+0.4
-0.3
+0.0
stress
KB with Totarol 10 mM
+0.8
-0.1
-0.2
-0.1
+0.2
stress
KB with Berberine 15.6 ug/ml
+0.5
+0.2
+0.4
-0.1
-0.1
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.1
+0.4
+0.7
-0.1
+0.0
stress
KB with Conessine 10 mM
+0.7
-0.1
+0.4
+0.0
-0.0
stress
KB with Cotarnine Chloride 10 mM
+0.5
-0.2
+0.7
+0.0
+0.1
stress
KB with Sclareolide 10 mM
+1.0
-0.3
+0.5
+0.1
-0.0
stress
KB with Erythromycin 6.25 ug/ml
+0.7
+0.3
+0.4
-0.0
-0.1
stress
KB with Palmatine 10 mM
+0.9
+0.2
+0.3
+0.0
+0.0
stress
KB with Harmine 10 mM
+0.4
+0.5
+0.4
+0.0
-0.0
stress
KB with Levodopa 10 mM
+0.9
+0.2
+0.3
+0.2
+0.0
stress
KB with Carbenicillin 3.1 ug/ml
+1.6
+0.6
+0.5
-0.0
-0.1
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