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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4789 and Psyr_4790 are separated by 27 nucleotides
Psyr_4790 and Psyr_4791 are separated by 22 nucleotides
Psyr_4791 and Psyr_4792 are separated by 83 nucleotides
Psyr_4792 and Psyr_4793 are separated by 258 nucleotides
Psyr_4789: Psyr_4789 - lipoprotein, putative, at 5,676,897 to 5,677,127
_4789
Psyr_4790: Psyr_4790 - phosphoglycerate kinase, at 5,677,155 to 5,678,318
_4790
Psyr_4791: Psyr_4791 - D-erythrose-4-phosphate dehydrogenase, at 5,678,341 to 5,679,384
_4791
Psyr_4792: Psyr_4792 - transketolase, at 5,679,468 to 5,681,465
_4792
Psyr_4793: Psyr_4793 - transcriptional regulator, ArsR family, at 5,681,724 to 5,682,719
_4793
Group
Condition
Psyr
_4789
Psyr
_4790
Psyr
_4791
Psyr
_4792
Psyr
_4793
in planta
epiphytic; Lima bean
+0.1
N.D.
-4.5
N.D.
-0.4
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.9
N.D.
-3.8
N.D.
+0.0
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.5
N.D.
-2.9
N.D.
-0.4
stress
KB with Rotenone 0.125 mg/ml
-0.6
N.D.
-3.0
N.D.
+0.0
stress
KB with Ampicillin 0.775 ug/ml
-0.2
N.D.
-3.1
N.D.
+0.0
stress
KB with Nitrofurantoin 0.0625 mg/ml
-0.2
N.D.
-3.1
N.D.
+0.0
stress
KB with Nalidixic 0.775 ug/ml
-0.7
N.D.
-2.3
N.D.
-0.1
stress
KB with Oxonitine 10 mM
-0.2
N.D.
-2.8
N.D.
-0.0
stress
KB with Phloretin 125 ug/ml
-0.2
N.D.
-2.8
N.D.
+0.1
kb
KB
-0.2
N.D.
-2.3
N.D.
-0.2
stress
KB with Acriflavine 1.25 ug/ml
-0.5
N.D.
-2.0
N.D.
-0.2
stress
KB with Tetracycline 0.0015 ug/ml
-0.7
N.D.
-1.9
N.D.
-0.1
stress
KB with Flavone 0.125 mg/ml
-0.1
N.D.
-2.4
N.D.
-0.1
stress
KB with capsaicin 0.125 mg/ml
-0.2
N.D.
-2.4
N.D.
-0.1
stress
KB with Rotenone 0.25 mg/ml
-0.0
N.D.
-2.5
N.D.
-0.1
kb
KB
-0.2
N.D.
-2.4
N.D.
+0.0
stress
KB with Trimethoprim 15.6 ug/ml
-0.8
N.D.
-1.6
N.D.
-0.1
stress
KB with Piperacillin 0.775 ug/ml
-0.2
N.D.
-2.0
N.D.
-0.3
stress
KB with Erythromycin 6.25 ug/ml
-0.5
N.D.
-2.0
N.D.
+0.0
stress
KB with Oxedrine 10 mM
+0.0
N.D.
-2.7
N.D.
+0.2
stress
KB with Avocadene 10 mM
-0.2
N.D.
-2.2
N.D.
+0.0
stress
KB with Escin 10 mM
-0.0
N.D.
-2.4
N.D.
+0.2
stress
KB with capsaicin 0.25 mg/ml
-0.6
N.D.
-1.3
N.D.
-0.3
stress
KB with Sinomenine 10 mM
-0.0
N.D.
-2.4
N.D.
+0.2
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.2
N.D.
-2.0
N.D.
+0.1
in planta
Green bean; epiphytic
+0.1
N.D.
-2.1
N.D.
+0.1
stress
KB with Isosafrole 10 mM
+0.0
N.D.
-2.0
N.D.
+0.1
stress
KB with Avocatin A 10 mM
+0.7
N.D.
-2.0
N.D.
+0.3
stress
KB with 4-hydroxychalcone 10 mM
+0.5
N.D.
-1.2
N.D.
+0.5
stress
KB with Terpene 10 mM
+0.7
N.D.
-1.2
N.D.
+0.6
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