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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4669 and Psyr_4670 are separated by 135 nucleotides
Psyr_4670 and Psyr_4671 are separated by 88 nucleotides
Psyr_4671 and Psyr_4672 are separated by 8 nucleotides
Psyr_4672 and Psyr_4673 overlap by 4 nucleotides
Psyr_4669: Psyr_4669 - pyrroloquinoline quinone synthesis related protease (pqqF), Metallo peptidase, MEROPS family M16A, at 5,534,830 to 5,537,118
_4669
Psyr_4670: Psyr_4670 - coenzyme PQQ synthesis protein A, at 5,537,254 to 5,537,328
_4670
Psyr_4671: Psyr_4671 - coenzyme PQQ synthesis protein B, at 5,537,417 to 5,538,328
_4671
Psyr_4672: Psyr_4672 - Coenzyme PQQ synthesis C, at 5,538,337 to 5,539,092
_4672
Psyr_4673: Psyr_4673 - Coenzyme PQQ synthesis D, at 5,539,089 to 5,539,373
_4673
Group
Condition
Psyr
_4669
Psyr
_4670
Psyr
_4671
Psyr
_4672
Psyr
_4673
stress
KB with Auraptene 10 mM
-0.4
-0.4
-0.2
-0.0
N.D.
stress
KB with Veratrine 10 mM
-0.5
-0.2
-0.2
-0.1
N.D.
stress
KB with Totarol 10 mM
-0.3
-0.3
-0.4
-0.1
N.D.
stress
KB with Piperine 10 mM
-0.5
-0.3
-0.2
-0.0
N.D.
stress
KB with Levodopa 10 mM
-0.1
-0.5
-0.1
-0.2
N.D.
stress
KB with Solanesol 10 mM
+0.2
-0.5
-0.3
-0.1
N.D.
stress
KB with Lawsone 10 mM
-0.2
+0.2
-0.5
-0.2
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.0
-0.2
-0.4
-0.1
N.D.
stress
KB with Chrysophanol 10 mM
-0.1
-0.4
-0.2
+0.0
N.D.
stress
KB with Sclareolide 10 mM
-0.2
-0.4
+0.1
+0.1
N.D.
stress
KB with L-alliin 10 mM
-0.0
-0.5
+0.1
-0.0
N.D.
stress
KB with Acriflavine 1.25 ug/ml
-0.1
-0.2
+0.2
-0.1
N.D.
stress
KB with Oxonitine 10 mM
+0.1
-0.3
-0.2
+0.1
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.3
+0.3
-0.2
-0.1
N.D.
stress
KB with Avocatin A 10 mM
-0.3
+0.1
-0.2
+0.1
N.D.
stress
KB with d-limonene 10 mM
+0.1
-0.4
-0.1
+0.1
N.D.
in planta
Green bean; epiphytic
+0.2
-0.4
+0.1
+0.1
N.D.
stress
KB with Acridine orange 3.125 ug/ml
+0.4
-0.1
-0.2
-0.0
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.0
+0.3
+0.2
-0.4
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.6
+0.1
-0.3
N.D.
in planta
epiphytic; Lima bean
-0.5
+0.9
-0.3
+0.1
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.7
-0.0
-0.2
N.D.
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.3
-0.2
-0.1
+0.2
N.D.
in planta
epiphytic; Lima bean
+0.1
+0.9
-0.2
-0.3
N.D.
in planta
apoplastic, chopping recovery; Green bean
+0.1
+0.5
+0.1
-0.2
N.D.
stress
KB with Harmine 10 mM
+0.3
+0.1
-0.1
+0.3
N.D.
stress
KB with Escin 10 mM
+0.1
+0.4
+0.3
-0.1
N.D.
stress
KB with Erythromycin 6.25 ug/ml
+0.1
+0.3
+0.3
-0.1
N.D.
kb
KB
+0.0
+0.2
+0.5
+0.1
N.D.
stress
KB with Mitomycin C 0.05 ug/ml
+0.8
+0.4
-0.3
-0.1
N.D.
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