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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4645 and Psyr_4646 are separated by 346 nucleotides
Psyr_4646 and Psyr_4647 are separated by 25 nucleotides
Psyr_4647 and Psyr_4648 are separated by 66 nucleotides
Psyr_4648 and Psyr_4649 are separated by 79 nucleotides
Psyr_4645: Psyr_4645 - Prevent-host-death protein, at 5,509,027 to 5,509,275
_4645
Psyr_4646: Psyr_4646 - Phage integrase:Phage integrase, N-terminal SAM-like protein, at 5,509,622 to 5,510,575
_4646
Psyr_4647: Psyr_4647 - hypothetical protein, at 5,510,601 to 5,510,921
_4647
Psyr_4648: Psyr_4648 - hypothetical protein, at 5,510,988 to 5,511,227
_4648
Psyr_4649: Psyr_4649 - GCN5-related N-acetyltransferase, at 5,511,307 to 5,511,816
_4649
Group
Condition
Psyr
_4645
Psyr
_4646
Psyr
_4647
Psyr
_4648
Psyr
_4649
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
-0.2
-0.3
-0.5
-0.2
stress
KB with Escin 10 mM
N.D.
-0.0
-0.2
-0.8
-0.1
stress
KB with Acriflavine 1.25 ug/ml
N.D.
-0.0
-0.4
-0.3
-0.0
stress
KB with Novobiocin 7.75 ug/ml
N.D.
-0.1
-0.4
-0.2
-0.1
stress
KB with Oxedrine 10 mM
N.D.
+0.1
-0.1
-0.6
-0.1
stress
KB with Tetracycline 0.0015 ug/ml
N.D.
+0.1
-0.1
-0.6
-0.1
stress
KB with Mitomycin C 0.05 ug/ml
N.D.
-0.3
-0.2
+0.2
-0.3
in planta
Green bean; epiphytic
N.D.
-0.1
-0.4
+0.3
+0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
-0.1
+0.6
-0.5
+0.1
stress
KB with Flavone 0.125 mg/ml
N.D.
+0.2
-0.1
+0.4
-0.2
stress
KB with 4-hydroxychalcone 10 mM
N.D.
-0.1
+0.6
-0.1
+0.0
in planta
Green bean; epiphytic
N.D.
+0.1
+0.2
-0.2
+0.4
stress
KB with Lupeol 10 mM
N.D.
-0.2
+0.7
-0.1
+0.0
stress
KB with Harmol 10 mM
N.D.
+0.0
+0.7
+0.1
-0.4
stress
KB with Totarol 10 mM
N.D.
-0.1
+0.6
-0.0
+0.1
stress
KB with Paclitaxel 10 mM
N.D.
-0.1
+0.7
-0.0
-0.1
stress
KB with Biochanin a diacetate 10 mM
N.D.
-0.1
+0.6
+0.1
+0.0
kb
KB
N.D.
-0.1
+0.5
+0.1
+0.1
stress
KB with Chaulmoogric 10 mM
N.D.
-0.1
+0.7
+0.1
-0.1
stress
KB with Nonanoic 10 mM
N.D.
+0.0
+0.8
+0.1
-0.2
stress
KB with L-alliin 10 mM
N.D.
-0.1
+0.6
+0.2
-0.0
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.1
+0.1
+0.5
+0.2
stress
KB with Prenyletin 10 mM
N.D.
-0.1
+0.5
+0.3
+0.1
stress
KB with Palmatine 10 mM
N.D.
-0.2
+0.8
+0.2
-0.0
stress
KB with Auraptene 10 mM
N.D.
-0.0
+0.5
+0.3
+0.1
stress
KB with Anethole 10 mM
N.D.
-0.0
+0.6
+0.1
+0.2
stress
KB with Palmatine chloride 10 mM
N.D.
-0.1
+0.9
+0.0
+0.0
stress
KB with Curcumin 10 mM
N.D.
-0.0
+0.7
+0.3
+0.0
in planta
epiphytic; Lima bean
N.D.
-0.1
+0.3
+0.5
+0.3
stress
KB with Physcion 10 mM
N.D.
+0.1
+1.0
+0.1
+0.0
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