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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_RNA74 and Psyr_4565 are separated by 507 nucleotides
Psyr_4565 and Psyr_4566 are separated by 201 nucleotides
Psyr_4566 and Psyr_4567 are separated by 3 nucleotides
Psyr_4567 and Psyr_4568 are separated by 62 nucleotides
Psyr_RNA74: Psyr_RNA74 - 16S ribosomal RNA, at 5,426,727 to 5,428,264
_RNA74
Psyr_4565: Psyr_4565 - tyrosyl-tRNA synthetase, at 5,428,772 to 5,429,983
_4565
Psyr_4566: Psyr_4566 - Peptidase M23B, at 5,430,185 to 5,431,612
_4566
Psyr_4567: Psyr_4567 - Protein of unknown function UPF0075, at 5,431,616 to 5,432,710
_4567
Psyr_4568: Psyr_4568 - HesB/YadR/YfhF, at 5,432,773 to 5,433,123
_4568
Group
Condition
Psyr
_RNA74
Psyr
_4565
Psyr
_4566
Psyr
_4567
Psyr
_4568
stress
KB with Harmine 10 mM
N.D.
N.D.
N.D.
-2.5
N.D.
stress
KB with Berberine 15.6 ug/ml
N.D.
N.D.
N.D.
-1.9
N.D.
stress
KB with Acriflavine 1.25 ug/ml
N.D.
N.D.
N.D.
-1.8
N.D.
stress
KB with Acridine orange 3.125 ug/ml
N.D.
N.D.
N.D.
-1.8
N.D.
stress
KB with Palmatine chloride 10 mM
N.D.
N.D.
N.D.
-1.3
N.D.
stress
KB with Avocadyne 10 mM
N.D.
N.D.
N.D.
-1.3
N.D.
in planta
Green bean; epiphytic
N.D.
N.D.
N.D.
-1.2
N.D.
stress
KB with Avocatin A 10 mM
N.D.
N.D.
N.D.
-1.1
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
N.D.
N.D.
N.D.
-1.0
N.D.
stress
KB with Gossypol-Acetic Acid Complex 10 mM
N.D.
N.D.
N.D.
-0.9
N.D.
stress
KB with capsaicin 0.25 mg/ml
N.D.
N.D.
N.D.
-0.9
N.D.
in planta
Green bean; epiphytic
N.D.
N.D.
N.D.
-0.9
N.D.
stress
KB with Harmol Hydrochloride 10 mM
N.D.
N.D.
N.D.
-0.9
N.D.
stress
KB with Quercetin 360 ug/ml
N.D.
N.D.
N.D.
-0.9
N.D.
stress
KB with Methanol 5 vol%
N.D.
N.D.
N.D.
-0.8
N.D.
in planta
epiphytic; Lima bean
N.D.
N.D.
N.D.
-0.8
N.D.
stress
KB with Sinomenine 10 mM
N.D.
N.D.
N.D.
-0.7
N.D.
stress
KB with D-Salicin 240 ug/ml
N.D.
N.D.
N.D.
-0.7
N.D.
stress
KB with Harmol 10 mM
N.D.
N.D.
N.D.
-0.7
N.D.
stress
KB with Flavone 0.125 mg/ml
N.D.
N.D.
N.D.
-0.7
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
N.D.
N.D.
-0.6
N.D.
stress
KB with Anethole 10 mM
N.D.
N.D.
N.D.
-0.6
N.D.
stress
KB with Rotenone 0.25 mg/ml
N.D.
N.D.
N.D.
-0.6
N.D.
in planta
apoplastic; Green bean; 6 days
N.D.
N.D.
N.D.
-0.6
N.D.
stress
KB with Gossypetin 10 mM
N.D.
N.D.
N.D.
-0.6
N.D.
stress
KB with Totarol 10 mM
N.D.
N.D.
N.D.
-0.6
N.D.
stress
KB with Mitomycin C 0.05 ug/ml
N.D.
N.D.
N.D.
+1.0
N.D.
stress
KB with Erythromycin 6.25 ug/ml
N.D.
N.D.
N.D.
+1.2
N.D.
stress
KB with Novobiocin 7.75 ug/ml
N.D.
N.D.
N.D.
+1.6
N.D.
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
N.D.
N.D.
+2.3
N.D.
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