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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4518 and Psyr_4519 are separated by 9 nucleotides
Psyr_4519 and Psyr_4520 are separated by 78 nucleotides
Psyr_4520 and Psyr_4521 are separated by 94 nucleotides
Psyr_4521 and Psyr_4522 are separated by 154 nucleotides
Psyr_4518: Psyr_4518 - single-strand binding protein, at 5,382,540 to 5,383,091
_4518
Psyr_4519: Psyr_4519 - General substrate transporter:Major facilitator superfamily, at 5,383,101 to 5,384,495
_4519
Psyr_4520: Psyr_4520 - Excinuclease ABC subunit A, at 5,384,574 to 5,387,459
_4520
Psyr_4521: Psyr_4521 - Bacterioferritin, at 5,387,554 to 5,388,018
_4521
Psyr_4522: Psyr_4522 - Catalase, at 5,388,173 to 5,389,618
_4522
Group
Condition
Psyr
_4518
Psyr
_4519
Psyr
_4520
Psyr
_4521
Psyr
_4522
stress
KB with Nitrofurantoin 0.0625 mg/ml
N.D.
-0.7
-3.2
+0.3
+0.5
stress
KB with Avocadyne 10 mM
N.D.
-3.1
-0.1
+0.2
+0.2
stress
KB with Lawsone 10 mM
N.D.
-3.1
-0.2
+0.2
+0.2
stress
KB with Chrysophanol 10 mM
N.D.
-2.9
-0.1
+0.3
+0.1
stress
KB with Avocatin A 10 mM
N.D.
-2.7
-0.1
+0.1
+0.1
stress
KB with Piperine 10 mM
N.D.
-2.9
-0.2
+0.3
+0.2
stress
KB with Anethole 10 mM
N.D.
-2.7
-0.2
+0.1
+0.1
stress
KB with 4-hydroxychalcone 10 mM
N.D.
-2.9
-0.1
+0.2
+0.3
stress
KB with Nonanoic 10 mM
N.D.
-2.6
-0.1
+0.1
+0.2
stress
KB with Terpene 10 mM
N.D.
-2.7
-0.2
+0.3
+0.2
stress
KB with Nitrofurantoin 31.25 ug/ml
N.D.
-0.7
-2.3
+0.2
+0.3
stress
KB with Emodin 10 mM
N.D.
-2.5
-0.1
+0.2
+0.1
stress
KB with Curcumin 10 mM
N.D.
-2.6
-0.0
+0.2
+0.3
stress
KB with Paclitaxel 10 mM
N.D.
-2.5
-0.0
+0.2
+0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
-2.4
-0.0
+0.0
+0.2
stress
KB with Sclareolide 10 mM
N.D.
-2.5
-0.1
+0.2
+0.2
stress
KB with Auraptene 10 mM
N.D.
-2.4
-0.0
+0.2
+0.1
stress
KB with Prenyletin 10 mM
N.D.
-2.5
-0.1
+0.2
+0.3
kb
KB
N.D.
-2.3
-0.1
+0.2
+0.2
kb
KB
N.D.
-2.1
-0.1
+0.2
+0.0
stress
KB with L-alliin 10 mM
N.D.
-2.1
-0.1
+0.3
+0.2
stress
KB with Levodopa 10 mM
N.D.
-1.8
-0.1
+0.3
-0.1
stress
KB with Diallyl sulfide 10 mM
N.D.
-2.1
+0.0
+0.3
+0.1
stress
KB with Piperic 10 mM
N.D.
-1.9
-0.1
+0.3
+0.1
stress
KB with Gossypetin 10 mM
N.D.
-1.9
-0.1
+0.3
+0.1
stress
KB with Hydrastine (1R, 9S) 10 mM
N.D.
-1.8
-0.1
+0.2
+0.2
stress
KB with Solanesol 10 mM
N.D.
-1.9
-0.0
+0.3
+0.2
stress
KB with Helenine 10 mM
N.D.
-2.0
+0.0
+0.3
+0.2
stress
KB with Palmatine chloride 10 mM
N.D.
-1.7
-0.2
+0.3
+0.2
stress
KB with Totarol 10 mM
N.D.
-1.7
-0.2
+0.4
+0.1
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