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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4469 and Psyr_4470 are separated by 69 nucleotides
Psyr_4470 and Psyr_4471 are separated by 1 nucleotides
Psyr_4471 and Psyr_4472 are separated by 8 nucleotides
Psyr_4472 and Psyr_4473 are separated by 103 nucleotides
Psyr_4469: Psyr_4469 - conserved hypothetical protein, at 5,329,987 to 5,330,574
_4469
Psyr_4470: Psyr_4470 - ABC transporter, at 5,330,644 to 5,331,354
_4470
Psyr_4471: Psyr_4471 - Protein of unknown function DUF214, at 5,331,356 to 5,332,621
_4471
Psyr_4472: Psyr_4472 - lipoprotein, putative, at 5,332,630 to 5,333,154
_4472
Psyr_4473: Psyr_4473 - OmpW, at 5,333,258 to 5,333,944
_4473
Group
Condition
Psyr
_4469
Psyr
_4470
Psyr
_4471
Psyr
_4472
Psyr
_4473
in planta
epiphytic; Lima bean
-1.1
-1.1
-0.3
+0.3
+0.5
in planta
apoplastic, chopping recovery; Green bean
-0.7
-0.4
-0.3
+0.2
-0.2
stress
KB with 4-hydroxychalcone 10 mM
-0.5
-0.1
-0.1
-0.0
-0.4
stress
KB with Mitomycin C 0.05 ug/ml
-0.0
-0.2
+0.2
-1.0
+0.1
stress
KB with Escin 10 mM
-0.0
+0.2
+0.1
-0.6
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.6
+0.3
-0.3
+0.3
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.8
+0.1
-0.2
+0.5
-0.1
stress
KB with Phloretin 125 ug/ml
-0.1
-0.2
-0.1
-0.4
+0.3
in planta
apoplastic, chopping recovery; Green bean
-0.4
+0.2
-0.3
+0.3
-0.1
stress
KB with Palmatine 10 mM
+0.4
+0.0
-0.2
-0.4
-0.2
stress
KB with Acridine orange 3.125 ug/ml
+0.4
-0.4
+0.4
-0.9
+0.2
stress
KB with Isosafrole 10 mM
-0.4
+0.2
+0.1
+0.2
-0.3
stress
KB with Anethole 10 mM
+0.4
-0.3
+0.1
-0.3
-0.1
stress
KB with Veratrine 10 mM
+0.4
+0.3
-0.1
-0.4
-0.3
stress
KB with Chloramphenicol 1.55 ug/ml
-0.3
+0.2
+0.2
+0.3
-0.2
stress
KB with Paclitaxel 10 mM
+0.3
+0.3
+0.0
-0.1
-0.4
stress
KB with capsaicin 0.125 mg/ml
+0.3
-0.4
+0.3
+0.2
-0.2
stress
KB with Totarol 10 mM
+0.3
+0.4
-0.2
+0.1
-0.4
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.2
-0.2
+0.2
+0.3
-0.2
stress
KB with Conessine 10 mM
+0.3
+0.2
+0.2
+0.0
-0.4
stress
KB with Solanesol 10 mM
+0.5
+0.1
+0.1
-0.1
-0.2
stress
KB with Lupeol 10 mM
+0.7
+0.1
-0.1
-0.1
-0.2
stress
KB with D-Salicin 240 ug/ml
-0.0
+0.4
-0.1
-0.2
+0.3
stress
KB with Diallyl sulfide 10 mM
+0.5
+0.4
+0.0
-0.1
-0.3
stress
KB with Terpene 10 mM
+0.6
+0.1
+0.1
+0.2
-0.3
stress
KB with Palmatine chloride 10 mM
+0.5
+0.4
+0.1
-0.3
+0.0
stress
KB with Gossypetin 10 mM
+0.6
+0.2
+0.2
-0.1
-0.1
stress
KB with Levodopa 10 mM
+0.6
+0.7
+0.1
-0.3
-0.1
stress
KB with Rotenone 0.25 mg/ml
+0.5
+0.2
+0.1
+0.4
-0.2
stress
KB with Nitrofurantoin 31.25 ug/ml
+0.2
+0.4
+0.2
+0.2
+0.1
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