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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4386 and Psyr_4387 are separated by 95 nucleotides
Psyr_4387 and Psyr_4388 are separated by 108 nucleotides
Psyr_4388 and Psyr_4389 are separated by 42 nucleotides
Psyr_4389 and Psyr_4390 are separated by 331 nucleotides
Psyr_4386: Psyr_4386 - conserved hypothetical protein, at 5,247,914 to 5,248,207
_4386
Psyr_4387: Psyr_4387 - Glycosyl transferase, family 51:Penicillin-binding protein, transpeptidase:Penicillin-binding, C-terminal, at 5,248,303 to 5,250,651
_4387
Psyr_4388: Psyr_4388 - Response regulator receiver, at 5,250,760 to 5,251,167
_4388
Psyr_4389: Psyr_4389 - Flp/Fap pilin component, at 5,251,210 to 5,251,416
_4389
Psyr_4390: Psyr_4390 - Flp pilus assembly CpaB, at 5,251,748 to 5,252,707
_4390
Group
Condition
Psyr
_4386
Psyr
_4387
Psyr
_4388
Psyr
_4389
Psyr
_4390
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.1
-1.4
-0.8
-0.1
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.0
-1.2
-1.1
-0.1
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.1
-1.3
-0.8
+0.0
in planta
apoplastic, chopping recovery; Green bean
N.D.
+0.2
-1.1
-0.6
-0.1
in planta
apoplastic; Green bean; 6 days
N.D.
-0.1
-0.9
+0.0
-0.5
stress
KB with Solanesol 10 mM
N.D.
+0.1
-0.7
-0.4
-0.3
stress
KB with Cotarnine Chloride 10 mM
N.D.
-0.3
-0.5
-0.4
-0.1
in planta
apoplastic; Green bean; 6 days
N.D.
-0.1
-0.7
-0.1
-0.4
stress
KB with capsaicin 0.125 mg/ml
N.D.
-0.1
-0.5
-0.0
-0.5
stress
KB with Rotenone 0.125 mg/ml
N.D.
-0.1
-0.4
-0.2
-0.4
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
+0.4
-0.3
-0.4
-0.4
stress
KB with Anabasine Hydrochloride 10 mM
N.D.
-0.1
-0.6
-0.1
+0.1
stress
KB with Nitrofurantoin 0.0625 mg/ml
N.D.
-0.1
-0.3
+0.1
-0.5
stress
KB with Escin 10 mM
N.D.
-0.1
+0.1
-0.6
+0.2
stress
KB with Novobiocin 7.75 ug/ml
N.D.
+0.1
+0.3
-0.4
-0.3
stress
KB with Physcion 10 mM
N.D.
+0.1
+0.4
-0.5
-0.3
stress
KB with Lupeol 10 mM
N.D.
-0.0
-0.2
-0.4
+0.3
kb
KB
N.D.
+0.2
+0.4
-0.5
-0.3
stress
KB with Acridine orange 3.125 ug/ml
N.D.
+0.0
+0.5
-0.7
+0.2
stress
KB with Trimethoprim 15.6 ug/ml
N.D.
+0.0
+0.4
-0.5
+0.1
stress
KB with Piperine 10 mM
N.D.
+0.2
+0.4
-0.3
-0.1
kb
KB
N.D.
+0.1
+0.7
-0.3
-0.2
stress
KB with Acriflavine 1.25 ug/ml
N.D.
+0.2
+0.3
-0.4
+0.3
stress
KB with Erythromycin 6.25 ug/ml
N.D.
+0.2
+0.3
-0.3
+0.3
stress
KB with Nalidixic 0.775 ug/ml
N.D.
+0.0
+0.8
-0.5
+0.2
in planta
Green bean; epiphytic
N.D.
-0.1
-0.3
+0.5
+0.4
stress
KB with Berberine 15.6 ug/ml
N.D.
+0.1
+0.5
-0.2
+0.2
stress
KB with Totarol 10 mM
N.D.
-0.2
+0.3
+0.4
+0.1
in planta
Green bean; epiphytic
N.D.
+0.0
-0.2
+0.3
+0.6
stress
KB with Piperacillin 0.775 ug/ml
N.D.
+0.1
+0.6
+0.0
+0.2
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