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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4289 and Psyr_4290 are separated by 4 nucleotides
Psyr_4290 and Psyr_4291 are separated by 61 nucleotides
Psyr_4291 and Psyr_4292 are separated by 877 nucleotides
Psyr_4292 and Psyr_4293 overlap by 4 nucleotides
Psyr_4289: Psyr_4289 - Protein of unknown function Zinc binding 2, at 5,115,850 to 5,116,740
_4289
Psyr_4290: Psyr_4290 - conserved domain protein, at 5,116,745 to 5,117,734
_4290
Psyr_4291: Psyr_4291 - hypothetical protein, at 5,117,796 to 5,118,161
_4291
Psyr_4292: Psyr_4292 - HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1, at 5,119,039 to 5,119,629
_4292
Psyr_4293: Psyr_4293 - Acyl-CoA thioesterase, at 5,119,626 to 5,120,495
_4293
Group
Condition
Psyr
_4289
Psyr
_4290
Psyr
_4291
Psyr
_4292
Psyr
_4293
stress
KB with Chaulmoogric 10 mM
+0.1
-0.2
-0.3
-0.4
-1.9
stress
KB with capsaicin 0.125 mg/ml
-0.0
-0.3
-0.3
-0.1
-0.2
stress
KB with capsaicin 0.25 mg/ml
+0.3
-0.4
-0.8
+0.1
-0.2
stress
KB with Rotenone 0.125 mg/ml
+0.2
-0.2
-0.6
+0.0
-0.3
stress
KB with Nitrofurantoin 0.0625 mg/ml
+0.1
-0.2
-0.5
-0.1
-0.1
stress
KB with Rotenone 0.25 mg/ml
+0.2
-0.2
-0.5
-0.1
-0.2
kb
KB
+0.2
-0.1
-0.5
-0.2
-0.1
stress
KB with Avocatin A 10 mM
+0.3
-0.1
-0.4
-0.1
-0.2
stress
KB with Flavone 0.125 mg/ml
+0.2
-0.3
-0.3
+0.0
-0.2
kb
KB
-0.2
+0.3
-0.4
-0.1
-0.1
stress
KB with Piperine 10 mM
+0.1
-0.2
+0.5
-0.1
-0.6
stress
KB with Rifampicin 0.1 mg/ml
+0.3
-0.2
-0.1
-0.1
-0.1
stress
KB with Acriflavine 1.25 ug/ml
-0.3
+0.1
+0.3
-0.2
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.4
-0.1
-0.4
+0.1
-0.1
in planta
apoplastic; Green bean; 6 days
+0.2
-0.5
-0.1
+0.3
-0.1
in planta
apoplastic, chopping recovery; Green bean
-0.6
+0.1
+0.2
+0.2
+0.1
stress
KB with Novobiocin 7.75 ug/ml
+0.3
-0.2
+0.3
-0.2
-0.1
stress
KB with Levodopa 10 mM
+0.4
+0.2
-0.2
-0.2
+0.1
in planta
apoplastic, chopping recovery; Green bean
-0.4
+0.3
+0.3
-0.1
+0.1
stress
KB with Mitomycin C 0.05 ug/ml
+0.4
+0.2
-0.2
+0.1
-0.1
stress
KB with Cotarnine Chloride 10 mM
+0.1
+0.3
+0.4
-0.1
-0.3
stress
KB with Usnic Acid 10 mM
+0.2
+0.1
+0.3
+0.1
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.4
+0.5
+0.7
+0.0
-0.1
stress
KB with Diallyl sulfide 10 mM
+0.3
+0.2
+0.3
-0.2
+0.0
stress
KB with Paclitaxel 10 mM
+0.2
-0.1
+0.6
-0.1
+0.0
stress
KB with Acridine orange 3.125 ug/ml
+0.0
+0.4
+0.1
+0.4
-0.2
stress
KB with Physcion 10 mM
+0.3
+0.0
+0.3
-0.1
+0.2
in planta
apoplastic, chopping recovery; Green bean
-0.4
+0.4
+0.6
+0.1
+0.1
stress
KB with Carbenicillin 3.1 ug/ml
+0.7
-0.2
+0.7
+0.1
-0.4
stress
KB with Isosafrole 10 mM
+0.4
+0.1
+0.6
+0.0
+0.1
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