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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4271 and Psyr_4272 are separated by 95 nucleotides
Psyr_4272 and Psyr_4273 are separated by 27 nucleotides
Psyr_4273 and Psyr_4274 are separated by 284 nucleotides
Psyr_4274 and Psyr_4275 are separated by 6 nucleotides
Psyr_4271: Psyr_4271 - Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K, at 5,095,480 to 5,096,457
_4271
Psyr_4272: Psyr_4272 - Protein of unknown function DUF466, at 5,096,553 to 5,096,750
_4272
Psyr_4273: Psyr_4273 - Carbon starvation protein CstA, at 5,096,778 to 5,098,853
_4273
Psyr_4274: Psyr_4274 - conserved hypothetical protein, at 5,099,138 to 5,099,506
_4274
Psyr_4275: Psyr_4275 - DNA replication and repair protein RadA, at 5,099,513 to 5,100,880
_4275
Group
Condition
Psyr
_4271
Psyr
_4272
Psyr
_4273
Psyr
_4274
Psyr
_4275
in planta
epiphytic; Lima bean
+0.1
-0.3
-0.3
-0.8
-0.2
stress
KB with Avocatin A 10 mM
+0.2
-0.4
-0.2
-0.5
-0.0
stress
KB with Mitomycin C 0.05 ug/ml
+0.2
-0.1
+0.2
+0.2
-0.9
stress
KB with Lupeol 10 mM
-0.0
-0.5
-0.2
+0.3
-0.0
stress
KB with Acriflavine 1.25 ug/ml
+0.3
-0.2
-0.2
-0.1
-0.2
stress
KB with L-alliin 10 mM
+0.1
-0.8
+0.0
+0.0
+0.2
stress
KB with Diallyl sulfide 10 mM
+0.3
-0.7
-0.1
-0.2
+0.2
in planta
epiphytic; Lima bean
-0.3
-0.3
-0.3
+0.5
+0.0
stress
KB with Palmatine chloride 10 mM
+0.1
-0.6
-0.1
+0.1
+0.2
stress
KB with Chrysophanol 10 mM
+0.1
-0.7
-0.2
+0.2
+0.2
stress
KB with Harmine 10 mM
+0.1
+0.2
-0.2
+0.2
-0.4
stress
KB with Veratrine 10 mM
+0.1
-0.4
-0.1
+0.1
+0.2
stress
KB with Emodin 10 mM
-0.2
-0.5
-0.0
+0.4
+0.3
stress
KB with Oxedrine 10 mM
-0.2
+0.5
-0.3
+0.2
-0.1
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
-0.1
-0.4
-0.1
+0.3
+0.2
stress
KB with Palmatine 10 mM
-0.2
-0.3
-0.2
+0.5
+0.3
in planta
Green bean; epiphytic
+0.4
-0.5
+0.0
-0.2
+0.3
stress
KB with Curcumin 10 mM
+0.0
-0.4
-0.2
+0.5
+0.2
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.6
-0.1
-0.1
-0.1
stress
KB with Helenine 10 mM
+0.1
-0.3
-0.2
+0.4
+0.1
stress
KB with d-limonene 10 mM
-0.3
-0.2
-0.0
+0.4
+0.4
in planta
apoplastic, chopping recovery; Green bean
-0.3
+0.4
+0.0
-0.1
+0.3
stress
KB with Carbenicillin 3.1 ug/ml
+0.3
+0.3
-0.2
-0.2
+0.1
stress
KB with Conessine 10 mM
+0.2
-0.4
-0.1
+0.4
+0.2
in planta
apoplastic, chopping recovery; Green bean
-0.1
+0.6
+0.0
-0.3
+0.3
in planta
apoplastic; Green bean; 6 days
-0.2
+0.8
+0.3
-0.4
+0.0
stress
KB with Ampicillin 0.775 ug/ml
+0.1
+0.1
-0.3
+0.3
+0.3
stress
KB with Acridine orange 3.125 ug/ml
+0.6
-0.4
-0.1
+0.3
+0.2
in planta
apoplastic; Green bean; 6 days
+0.1
+0.5
+0.3
-0.3
+0.0
in planta
apoplastic, chopping recovery; Green bean
+0.1
+0.7
+0.2
-0.0
+0.5
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