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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4256 and Psyr_4257 are separated by 108 nucleotides
Psyr_4257 and Psyr_4258 are separated by 120 nucleotides
Psyr_4258 and Psyr_4259 are separated by 168 nucleotides
Psyr_4259 and Psyr_4260 are separated by 276 nucleotides
Psyr_4256: Psyr_4256 - conserved hypothetical protein, at 5,073,656 to 5,073,964
_4256
Psyr_4257: Psyr_4257 - Uncharacterized protein UPF0114, at 5,074,073 to 5,074,561
_4257
Psyr_4258: Psyr_4258 - conserved hypothetical protein, at 5,074,682 to 5,075,011
_4258
Psyr_4259: Psyr_4259 - ATP-dependent protease, putative, at 5,075,180 to 5,077,615
_4259
Psyr_4260: Psyr_4260 - conserved hypothetical protein, at 5,077,892 to 5,078,380
_4260
Group
Condition
Psyr
_4256
Psyr
_4257
Psyr
_4258
Psyr
_4259
Psyr
_4260
stress
KB with Mitomycin C 0.05 ug/ml
-0.4
-0.5
-0.5
-0.0
-0.2
stress
KB with Totarol 10 mM
-0.2
-0.3
-0.2
-0.4
-0.2
stress
KB with Harmol Hydrochloride 10 mM
-0.2
-0.3
+0.1
-0.5
-0.2
stress
KB with Palmatine chloride 10 mM
-0.2
-0.0
-0.1
-0.2
-0.4
stress
KB with Acriflavine 1.25 ug/ml
-0.2
-0.4
+0.1
-0.2
-0.2
stress
KB with Levodopa 10 mM
-0.2
-0.1
-0.2
-0.3
-0.0
stress
KB with Carbenicillin 3.1 ug/ml
-0.1
-0.2
-0.3
+0.1
-0.4
stress
KB with Conessine 10 mM
-0.2
-0.2
-0.4
-0.1
+0.0
stress
KB with 4-acetoxyphenol 10 mM
-0.4
+0.2
+0.1
-0.3
-0.4
stress
KB with Veratrine 10 mM
+0.1
-0.2
-0.1
-0.3
-0.2
stress
KB with Harmine 10 mM
-0.1
-0.2
-0.0
-0.4
+0.1
stress
KB with Terpene 10 mM
-0.1
+0.0
+0.2
-0.1
-0.6
stress
KB with Curcumin 10 mM
+0.2
-0.2
+0.1
-0.4
-0.2
stress
KB with Chloramphenicol 1.55 ug/ml
-0.2
-0.2
+0.2
-0.0
-0.2
stress
KB with Erythromycin 6.25 ug/ml
+0.2
-0.4
-0.3
+0.0
+0.0
stress
KB with 4-hydroxychalcone 10 mM
-0.2
+0.0
+0.2
-0.3
-0.2
stress
KB with Avocatin A 10 mM
-0.1
+0.1
+0.2
-0.6
+0.0
stress
KB with Gossypetin 10 mM
-0.2
+0.0
+0.2
-0.3
-0.1
stress
KB with Helenine 10 mM
-0.1
-0.3
+0.3
-0.2
+0.1
stress
KB with Chrysophanol 10 mM
-0.0
-0.5
+0.3
-0.1
+0.2
stress
KB with Nonanoic 10 mM
+0.1
+0.2
+0.1
-0.2
-0.3
stress
KB with Avocadyne 10 mM
-0.2
+0.3
+0.1
-0.1
-0.2
in planta
epiphytic; Lima bean
+0.0
+0.3
-0.4
+0.1
-0.2
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.2
-0.3
+0.2
-0.1
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
+0.3
-0.2
+0.1
-0.2
stress
KB with Cotarnine Chloride 10 mM
-0.0
-0.1
+0.4
-0.3
+0.2
stress
KB with Diallyl sulfide 10 mM
+0.1
+0.2
+0.4
-0.2
-0.2
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.1
+0.4
+0.0
+0.3
in planta
apoplastic; Green bean; 6 days
+0.0
+0.5
+0.2
+0.2
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.0
+0.3
+0.4
+0.1
+0.1
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