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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4232 and Psyr_4233 are separated by 209 nucleotides
Psyr_4233 and Psyr_4234 are separated by 96 nucleotides
Psyr_4234 and Psyr_4235 are separated by 257 nucleotides
Psyr_4235 and Psyr_4236 are separated by 318 nucleotides
Psyr_4232: Psyr_4232 - Protein of unknown function DUF541, at 5,040,331 to 5,041,044
_4232
Psyr_4233: Psyr_4233 - PhcA, at 5,041,254 to 5,042,810
_4233
Psyr_4234: Psyr_4234 - extracellular solute-binding protein, family 5, at 5,042,907 to 5,044,514
_4234
Psyr_4235: Psyr_4235 - extracellular solute-binding protein, family 5, at 5,044,772 to 5,046,400
_4235
Psyr_4236: Psyr_4236 - extracellular solute-binding protein, family 5, at 5,046,719 to 5,048,311
_4236
Group
Condition
Psyr
_4232
Psyr
_4233
Psyr
_4234
Psyr
_4235
Psyr
_4236
in planta
Green bean; epiphytic
-0.7
+0.0
-0.0
-0.4
-0.1
in planta
Green bean; epiphytic
-0.8
+0.1
-0.2
-0.4
+0.1
in planta
apoplastic; Green bean; 6 days
-0.6
-0.1
-0.1
-0.1
+0.1
stress
KB with Harmol Hydrochloride 10 mM
+0.4
-0.2
+0.0
-0.0
-0.3
in planta
epiphytic; Lima bean
-0.1
+0.3
+0.1
-0.0
-0.4
in planta
apoplastic, chopping recovery; Green bean
+0.3
-0.4
-0.4
+0.2
+0.3
stress
KB with Chloramphenicol 1.55 ug/ml
-0.3
+0.2
-0.1
+0.2
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.2
-0.1
+0.1
+0.2
in planta
epiphytic; Lima bean
+0.5
-0.3
-0.0
-0.1
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.1
-0.3
+0.2
+0.3
stress
KB with Palmatine 10 mM
-0.4
+0.3
+0.1
+0.3
+0.1
stress
KB with Acridine orange 3.125 ug/ml
-0.4
-0.1
+0.2
+0.6
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.6
-0.3
-0.3
+0.2
+0.2
stress
KB with Nonanoic 10 mM
+0.3
-0.3
+0.1
+0.1
+0.2
stress
KB with Piperine 10 mM
+0.3
-0.1
-0.1
+0.3
-0.1
stress
KB with 4-acetoxyphenol 10 mM
+0.4
+0.1
-0.0
+0.2
-0.1
stress
KB with Harmine 10 mM
+0.3
-0.0
+0.1
+0.4
-0.0
stress
KB with Curcumin 10 mM
+0.3
+0.2
+0.2
+0.1
-0.0
stress
KB with Harmol 10 mM
+0.2
+0.2
+0.1
+0.3
-0.0
stress
KB with Tetracycline 0.0015 ug/ml
+0.2
+0.2
+0.1
+0.1
+0.2
stress
KB with Lawsone 10 mM
+0.5
+0.3
+0.0
+0.1
+0.1
stress
KB with L-alliin 10 mM
+0.5
+0.2
+0.1
+0.1
+0.1
stress
KB with Mitomycin C 0.05 ug/ml
+0.3
+0.1
+0.3
+0.2
+0.1
stress
KB with Helenine 10 mM
+0.3
+0.2
-0.0
+0.2
+0.2
stress
KB with Paclitaxel 10 mM
+0.1
+0.3
+0.2
+0.2
+0.1
stress
KB with Conessine 10 mM
+0.3
+0.3
+0.1
+0.2
+0.1
stress
KB with Sclareolide 10 mM
+0.4
+0.2
-0.0
+0.3
+0.1
stress
KB with Phloretin 125 ug/ml
+0.5
+0.3
-0.1
+0.1
+0.3
stress
KB with Berberine 15.6 ug/ml
+0.4
+0.3
-0.1
+0.3
+0.3
stress
KB with Chrysophanol 10 mM
+0.5
+0.4
+0.0
+0.3
+0.3
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