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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4230 and Psyr_4231 overlap by 4 nucleotides
Psyr_4231 and Psyr_4232 are separated by 192 nucleotides
Psyr_4232 and Psyr_4233 are separated by 209 nucleotides
Psyr_4233 and Psyr_4234 are separated by 96 nucleotides
Psyr_4230: Psyr_4230 - Helix-turn-helix, Fis-type, at 5,038,319 to 5,038,882
_4230
Psyr_4231: Psyr_4231 - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal, at 5,038,879 to 5,040,138
_4231
Psyr_4232: Psyr_4232 - Protein of unknown function DUF541, at 5,040,331 to 5,041,044
_4232
Psyr_4233: Psyr_4233 - PhcA, at 5,041,254 to 5,042,810
_4233
Psyr_4234: Psyr_4234 - extracellular solute-binding protein, family 5, at 5,042,907 to 5,044,514
_4234
Group
Condition
Psyr
_4230
Psyr
_4231
Psyr
_4232
Psyr
_4233
Psyr
_4234
stress
KB with Nitrofurantoin 0.0625 mg/ml
-1.3
-1.3
-0.0
+0.0
+0.1
stress
KB with Nitrofurantoin 31.25 ug/ml
-0.7
-0.6
+0.2
-0.0
-0.2
in planta
apoplastic; Green bean; 6 days
-0.1
-0.1
-0.6
-0.1
-0.1
in planta
Green bean; epiphytic
-0.2
+0.1
-0.8
+0.1
-0.2
stress
KB with Acridine orange 3.125 ug/ml
-0.5
+0.0
-0.4
-0.1
+0.2
stress
KB with Avocadyne 10 mM
-0.4
-0.5
+0.4
-0.0
-0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.2
-0.2
-0.2
-0.1
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.0
+0.1
+0.3
-0.4
-0.4
in planta
apoplastic, chopping recovery; Green bean
-0.1
+0.1
+0.6
-0.3
-0.3
stress
KB with Mitomycin C 0.05 ug/ml
-0.6
+0.1
+0.3
+0.1
+0.3
stress
KB with Palmatine 10 mM
+0.1
+0.4
-0.4
+0.3
+0.1
stress
KB with Berberine 15.6 ug/ml
-0.1
-0.1
+0.4
+0.3
-0.1
stress
KB with Nonanoic 10 mM
+0.2
+0.1
+0.3
-0.3
+0.1
stress
KB with Phloretin 125 ug/ml
-0.1
-0.0
+0.5
+0.3
-0.1
in planta
epiphytic; Lima bean
+0.4
-0.0
+0.5
-0.3
-0.0
stress
KB with Terpene 10 mM
+0.5
+0.2
-0.0
+0.1
+0.1
stress
KB with Helenine 10 mM
+0.4
-0.0
+0.3
+0.2
-0.0
kb
KB
+0.3
+0.3
+0.2
+0.1
-0.0
stress
KB with Palmatine chloride 10 mM
+0.5
+0.2
+0.1
+0.1
-0.0
stress
KB with Piperine 10 mM
+0.4
+0.3
+0.3
-0.1
-0.1
stress
KB with Solanesol 10 mM
+0.3
+0.1
+0.0
+0.3
+0.2
stress
KB with Lupeol 10 mM
+0.4
+0.2
+0.3
+0.1
-0.0
stress
KB with Emodin 10 mM
+0.3
+0.2
+0.1
+0.3
+0.1
stress
KB with Gossypetin 10 mM
+0.4
+0.3
+0.2
+0.2
+0.0
stress
KB with Paclitaxel 10 mM
+0.4
+0.1
+0.1
+0.3
+0.2
stress
KB with Sclareolide 10 mM
+0.3
+0.2
+0.4
+0.2
-0.0
stress
KB with Curcumin 10 mM
+0.2
+0.3
+0.3
+0.2
+0.2
stress
KB with L-alliin 10 mM
+0.4
+0.1
+0.5
+0.2
+0.1
stress
KB with Conessine 10 mM
+0.5
+0.2
+0.3
+0.3
+0.1
stress
KB with Chrysophanol 10 mM
+0.5
+0.1
+0.5
+0.4
+0.0
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