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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4223 and Psyr_4224 are separated by 636 nucleotides
Psyr_4224 and Psyr_4225 are separated by 243 nucleotides
Psyr_4225 and Psyr_4226 are separated by 10 nucleotides
Psyr_4226 and Psyr_4227 are separated by 164 nucleotides
Psyr_4223: Psyr_4223 - conserved hypothetical protein, at 5,030,003 to 5,030,203
_4223
Psyr_4224: Psyr_4224 - conserved hypothetical protein, at 5,030,840 to 5,031,079
_4224
Psyr_4225: Psyr_4225 - galactarate dehydratase, at 5,031,323 to 5,032,876
_4225
Psyr_4226: Psyr_4226 - D-galactonate transporter, at 5,032,887 to 5,034,272
_4226
Psyr_4227: Psyr_4227 - Dihydrodipicolinate synthetase, at 5,034,437 to 5,035,348
_4227
Group
Condition
Psyr
_4223
Psyr
_4224
Psyr
_4225
Psyr
_4226
Psyr
_4227
stress
KB with Oxonitine 10 mM
+0.1
N.D.
+0.0
+0.2
-0.3
in planta
epiphytic; Lima bean
+0.3
N.D.
+0.5
-0.2
-0.3
in planta
apoplastic, chopping recovery; Green bean
+0.3
N.D.
-0.2
+0.1
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.2
N.D.
-0.2
+0.2
+0.4
stress
KB with d-limonene 10 mM
-0.1
N.D.
+0.2
+0.2
+0.3
stress
KB with Curcumin 10 mM
+0.2
N.D.
-0.0
+0.2
+0.2
stress
KB with Acridine orange 3.125 ug/ml
+0.2
N.D.
+0.1
-0.0
+0.3
kb
KB
-0.0
N.D.
+0.1
+0.3
+0.3
in planta
apoplastic, chopping recovery; Green bean
+0.4
N.D.
-0.2
+0.1
+0.4
stress
KB with Totarol 10 mM
+0.1
N.D.
+0.1
+0.2
+0.3
stress
KB with Chaulmoogric 10 mM
+0.1
N.D.
+0.1
+0.2
+0.3
stress
KB with Mitomycin C 0.05 ug/ml
+0.6
N.D.
+0.2
+0.0
-0.0
stress
KB with Avocadyne 10 mM
+0.2
N.D.
+0.1
+0.2
+0.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
N.D.
+0.1
+0.1
+0.5
stress
KB with 4-acetoxyphenol 10 mM
+0.1
N.D.
+0.1
+0.2
+0.4
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.2
N.D.
+0.2
+0.1
+0.3
stress
KB with Auraptene 10 mM
+0.1
N.D.
+0.2
+0.2
+0.2
stress
KB with Gossypetin 10 mM
+0.2
N.D.
+0.1
+0.1
+0.3
stress
KB with Solanesol 10 mM
+0.2
N.D.
+0.1
+0.2
+0.3
stress
KB with Paclitaxel 10 mM
+0.1
N.D.
+0.1
+0.2
+0.3
stress
KB with Emodin 10 mM
+0.1
N.D.
+0.1
+0.2
+0.4
kb
KB
+0.2
N.D.
-0.0
+0.2
+0.4
stress
KB with Conessine 10 mM
+0.1
N.D.
+0.1
+0.2
+0.3
stress
KB with Piperic 10 mM
-0.0
N.D.
+0.2
+0.1
+0.5
stress
KB with Anethole 10 mM
+0.2
N.D.
+0.2
+0.1
+0.3
stress
KB with Physcion 10 mM
+0.1
N.D.
+0.2
+0.3
+0.3
stress
KB with Palmatine 10 mM
+0.1
N.D.
-0.0
+0.3
+0.4
stress
KB with Sclareolide 10 mM
+0.3
N.D.
+0.1
+0.2
+0.2
stress
KB with Helenine 10 mM
+0.2
N.D.
+0.1
+0.3
+0.4
stress
KB with Carbenicillin 3.1 ug/ml
+0.2
N.D.
+0.4
+0.0
+0.4
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Psyr_4225
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