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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4169 and Psyr_4170 overlap by 4 nucleotides
Psyr_4170 and Psyr_4171 are separated by 98 nucleotides
Psyr_4171 and Psyr_4172 are separated by 157 nucleotides
Psyr_4172 and Psyr_4173 are separated by 78 nucleotides
Psyr_4169: Psyr_4169 - 4-carboxymuconolactone decarboxylase, at 4,958,938 to 4,959,321
_4169
Psyr_4170: Psyr_4170 - Auxin Efflux Carrier, at 4,959,318 to 4,960,268
_4170
Psyr_4171: Psyr_4171 - Twin-arginine translocation pathway signal, at 4,960,367 to 4,961,950
_4171
Psyr_4172: Psyr_4172 - conserved hypothetical protein, at 4,962,108 to 4,963,124
_4172
Psyr_4173: Psyr_4173 - Protein of unknown function DUF748, at 4,963,203 to 4,966,232
_4173
Group
Condition
Psyr
_4169
Psyr
_4170
Psyr
_4171
Psyr
_4172
Psyr
_4173
in planta
apoplastic, chopping recovery; Green bean
-0.4
-0.1
+0.1
-0.4
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.2
-0.2
+0.0
-0.3
-0.3
in planta
apoplastic, chopping recovery; Green bean
-0.4
-0.1
+0.0
-0.3
-0.2
stress
KB with Totarol 10 mM
-0.5
+0.4
+0.2
-0.3
+0.2
stress
KB with Rotenone 0.125 mg/ml
-0.4
+0.4
+0.1
-0.1
+0.2
kb
KB
-0.2
+0.2
+0.2
-0.1
+0.3
stress
KB with Physcion 10 mM
+0.2
+0.3
+0.1
-0.3
+0.0
stress
KB with capsaicin 0.125 mg/ml
-0.1
+0.3
+0.2
-0.1
+0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.2
+0.3
+0.3
-0.2
+0.1
stress
KB with Nonanoic 10 mM
+0.3
+0.2
+0.2
-0.2
+0.1
stress
KB with Paclitaxel 10 mM
+0.4
+0.2
+0.2
-0.2
+0.1
stress
KB with Auraptene 10 mM
+0.4
+0.2
+0.2
-0.2
+0.2
stress
KB with Palmatine 10 mM
+0.4
+0.3
+0.2
-0.1
-0.0
stress
KB with Curcumin 10 mM
+0.4
+0.2
+0.3
-0.1
+0.1
stress
KB with d-limonene 10 mM
+0.3
+0.3
+0.3
-0.2
+0.1
stress
KB with Helenine 10 mM
+0.4
+0.2
+0.2
-0.0
+0.1
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.5
+0.1
+0.3
-0.0
+0.1
stress
KB with Cotarnine Chloride 10 mM
+0.2
+0.3
+0.1
+0.2
+0.2
stress
KB with Dimethyl Sulfoxide 0.42 vol%
+0.3
+0.2
+0.2
+0.1
+0.1
in planta
epiphytic; Lima bean
+0.4
+0.1
+0.3
+0.4
-0.2
stress
KB with Sinomenine 10 mM
+0.4
+0.2
+0.4
-0.1
+0.1
stress
KB with Acridine orange 3.125 ug/ml
+0.9
-0.2
+0.2
+0.0
+0.1
stress
KB with Piperic 10 mM
+0.2
+0.1
+0.5
+0.0
+0.2
stress
KB with Isosafrole 10 mM
+0.5
+0.1
+0.3
+0.1
+0.0
stress
KB with Emodin 10 mM
+0.5
+0.2
+0.2
+0.0
+0.1
stress
KB with Anabasine Hydrochloride 10 mM
+0.4
+0.2
+0.3
+0.1
-0.0
stress
KB with Terpene 10 mM
+0.6
+0.2
+0.3
-0.0
+0.1
stress
KB with Piperine 10 mM
+0.4
+0.2
+0.4
-0.1
+0.3
stress
KB with Chrysophanol 10 mM
+0.5
+0.3
+0.4
+0.1
+0.1
stress
KB with Sclareolide 10 mM
+0.5
+0.3
+0.4
+0.1
+0.1
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