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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4161 and Psyr_4162 overlap by 8 nucleotides
Psyr_4162 and Psyr_4163 are separated by 231 nucleotides
Psyr_4163 and Psyr_4164 are separated by 205 nucleotides
Psyr_4164 and Psyr_4165 are separated by 14 nucleotides
Psyr_4161: Psyr_4161 - Rod shape-determining protein MreD, at 4,950,807 to 4,951,298
_4161
Psyr_4162: Psyr_4162 - rod shape-determining protein MreC, at 4,951,291 to 4,952,364
_4162
Psyr_4163: Psyr_4163 - rod shape-determining protein MreB, at 4,952,596 to 4,953,633
_4163
Psyr_4164: Psyr_4164 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, at 4,953,839 to 4,954,126
_4164
Psyr_4165: Psyr_4165 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A, at 4,954,141 to 4,955,592
_4165
Group
Condition
Psyr
_4161
Psyr
_4162
Psyr
_4163
Psyr
_4164
Psyr
_4165
in planta
Green bean; epiphytic
-2.4
N.D.
N.D.
N.D.
N.D.
in planta
Green bean; epiphytic
-2.1
N.D.
N.D.
N.D.
N.D.
in planta
apoplastic, chopping recovery; Green bean
-2.1
N.D.
N.D.
N.D.
N.D.
stress
KB with Acriflavine 1.25 ug/ml
-2.0
N.D.
N.D.
N.D.
N.D.
stress
KB with Auraptene 10 mM
-2.0
N.D.
N.D.
N.D.
N.D.
stress
KB with Piperic 10 mM
-1.9
N.D.
N.D.
N.D.
N.D.
in planta
apoplastic, chopping recovery; Green bean
-1.8
N.D.
N.D.
N.D.
N.D.
stress
KB with Lawsone 10 mM
-1.6
N.D.
N.D.
N.D.
N.D.
in planta
epiphytic; Lima bean
-1.6
N.D.
N.D.
N.D.
N.D.
stress
KB with Gossypetin 10 mM
-1.5
N.D.
N.D.
N.D.
N.D.
stress
KB with Harmine 10 mM
-1.5
N.D.
N.D.
N.D.
N.D.
stress
KB with Escin 10 mM
-1.5
N.D.
N.D.
N.D.
N.D.
in planta
apoplastic, chopping recovery; Green bean
-1.4
N.D.
N.D.
N.D.
N.D.
kb
KB
-1.3
N.D.
N.D.
N.D.
N.D.
stress
KB with Palmatine 10 mM
-1.1
N.D.
N.D.
N.D.
N.D.
stress
KB with Hydrastine (1R, 9S) 10 mM
-1.1
N.D.
N.D.
N.D.
N.D.
stress
KB with Avocatin A 10 mM
-1.1
N.D.
N.D.
N.D.
N.D.
stress
KB with Avocadyne 10 mM
-1.0
N.D.
N.D.
N.D.
N.D.
stress
KB with Totarol 10 mM
-1.0
N.D.
N.D.
N.D.
N.D.
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
-0.9
N.D.
N.D.
N.D.
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.9
N.D.
N.D.
N.D.
N.D.
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.8
N.D.
N.D.
N.D.
N.D.
stress
KB with L-alliin 10 mM
-0.8
N.D.
N.D.
N.D.
N.D.
stress
KB with Quercetin 360 ug/ml
-0.8
N.D.
N.D.
N.D.
N.D.
stress
KB with Phloretin 125 ug/ml
-0.8
N.D.
N.D.
N.D.
N.D.
stress
KB with Prenyletin 10 mM
-0.7
N.D.
N.D.
N.D.
N.D.
stress
KB with Oxedrine 10 mM
-0.7
N.D.
N.D.
N.D.
N.D.
stress
KB with Helenine 10 mM
-0.7
N.D.
N.D.
N.D.
N.D.
stress
KB with Biochanin a diacetate 10 mM
-0.7
N.D.
N.D.
N.D.
N.D.
stress
KB with Harmol 10 mM
-0.7
N.D.
N.D.
N.D.
N.D.
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