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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4112 and Psyr_4113 are separated by 235 nucleotides
Psyr_4113 and Psyr_4114 overlap by 1 nucleotides
Psyr_4114 and Psyr_4115 are separated by 161 nucleotides
Psyr_4115 and Psyr_4116 overlap by 4 nucleotides
Psyr_4112: Psyr_4112 - Protein of unknown function UPF0011, at 4,902,628 to 4,903,542
_4112
Psyr_4113: Psyr_4113 - LppC putative lipoprotein, at 4,903,778 to 4,905,592
_4113
Psyr_4114: Psyr_4114 - Protein of unknown function UPF0102, at 4,905,592 to 4,905,963
_4114
Psyr_4115: Psyr_4115 - phosphoheptose isomerase, at 4,906,125 to 4,906,718
_4115
Psyr_4116: Psyr_4116 - Transport-associated protein, at 4,906,715 to 4,907,293
_4116
Group
Condition
Psyr
_4112
Psyr
_4113
Psyr
_4114
Psyr
_4115
Psyr
_4116
stress
KB with Erythromycin 6.25 ug/ml
-3.1
-1.9
-0.6
-0.0
-0.5
in planta
apoplastic, chopping recovery; Green bean
-1.3
-0.3
-0.3
-1.0
-2.0
stress
KB with Escin 10 mM
-1.0
+0.1
-0.4
-3.6
+0.2
stress
KB with Acriflavine 1.25 ug/ml
-1.4
-0.6
-0.5
-0.4
-1.1
in planta
apoplastic, chopping recovery; Green bean
-1.1
-0.2
+0.1
-1.3
-1.4
stress
KB with Carbenicillin 3.1 ug/ml
-0.8
-2.2
-0.5
+0.9
-1.1
stress
KB with Tetracycline 0.0015 ug/ml
-0.8
+0.4
-0.6
-2.0
-0.5
in planta
apoplastic, chopping recovery; Green bean
-1.1
-0.1
-0.1
+0.1
-2.3
stress
KB with Anethole 10 mM
-0.3
+0.2
+0.0
-2.5
-1.0
in planta
apoplastic, chopping recovery; Green bean
-1.1
-0.2
-0.2
-0.8
-0.9
stress
KB with Conessine 10 mM
-0.4
+0.2
-0.0
-2.1
-0.9
kb
KB
-0.4
+0.7
-0.6
-1.9
-0.8
stress
KB with Piperine 10 mM
-0.6
-0.6
-0.0
-0.9
-0.7
stress
KB with Novobiocin 7.75 ug/ml
-0.0
-0.7
+0.4
-2.4
-0.2
stress
KB with Veratrine 10 mM
-1.0
+0.4
+0.0
-1.4
-0.8
stress
KB with Acridine orange 3.125 ug/ml
-1.2
+0.6
+0.1
-0.8
-1.3
stress
KB with Harmine 10 mM
-0.6
-0.1
-0.4
-0.7
-0.9
stress
KB with Avocadyne 10 mM
-0.7
+0.4
+0.0
-1.0
-1.3
stress
KB with Piperacillin 0.775 ug/ml
-0.9
+0.2
-0.0
-2.0
+0.2
stress
KB with Trimethoprim 15.6 ug/ml
-0.9
+0.2
-0.0
-1.7
-0.1
stress
KB with Quercetin 360 ug/ml
-0.5
+0.1
+0.1
-2.7
+0.5
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.3
+0.5
-0.4
-1.2
-1.0
stress
KB with Palmatine chloride 10 mM
+0.0
+0.1
-0.2
+0.3
-2.7
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.8
+0.3
-0.3
-2.0
+0.6
kb
KB
-0.6
+0.7
-0.0
-1.2
-1.0
stress
KB with Avocatin A 10 mM
-0.3
+0.4
-0.2
-2.0
-0.1
in planta
epiphytic; Lima bean
-0.3
-0.2
+0.4
+0.7
-1.2
stress
KB with Chloramphenicol 1.55 ug/ml
-1.3
+0.4
+0.0
+1.6
-0.6
in planta
epiphytic; Lima bean
-0.2
+0.0
-0.0
+1.9
-0.9
stress
KB with Mitomycin C 0.05 ug/ml
+0.2
-0.7
+0.4
+2.3
+2.4
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