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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4023 and Psyr_4024 overlap by 4 nucleotides
Psyr_4024 and Psyr_4025 overlap by 4 nucleotides
Psyr_4025 and Psyr_4026 are separated by 50 nucleotides
Psyr_4026 and Psyr_4027 are separated by 28 nucleotides
Psyr_4023: Psyr_4023 - conserved hypothetical protein, at 4,790,447 to 4,792,036
_4023
Psyr_4024: Psyr_4024 - conserved hypothetical protein, at 4,792,033 to 4,793,250
_4024
Psyr_4025: Psyr_4025 - ATPase, at 4,793,247 to 4,794,287
_4025
Psyr_4026: Psyr_4026 - Protein of unknown function DUF58, at 4,794,338 to 4,795,627
_4026
Psyr_4027: Psyr_4027 - conserved hypothetical protein, at 4,795,656 to 4,796,015
_4027
Group
Condition
Psyr
_4023
Psyr
_4024
Psyr
_4025
Psyr
_4026
Psyr
_4027
stress
KB with Nalidixic 0.775 ug/ml
-0.1
-0.2
-0.2
-0.3
-0.1
in planta
epiphytic; Lima bean
-0.2
+0.3
-0.7
-0.4
+0.3
stress
KB with Physcion 10 mM
-0.1
-0.1
-0.3
+0.3
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.0
+0.0
+0.5
-0.2
-0.6
stress
KB with Oxonitine 10 mM
+0.1
-0.2
-0.4
+0.1
+0.1
stress
KB with Avocadyne 10 mM
-0.2
-0.2
+0.2
+0.3
-0.3
in planta
apoplastic, chopping recovery; Green bean
+0.0
+0.1
+0.3
+0.2
-0.5
stress
KB with Acriflavine 1.25 ug/ml
-0.0
+0.2
-0.4
+0.2
+0.1
stress
KB with Veratrine 10 mM
-0.2
-0.3
+0.3
+0.4
+0.0
stress
KB with Chrysophanol 10 mM
-0.2
-0.2
+0.4
+0.2
+0.0
stress
KB with Nitrofurantoin 0.0625 mg/ml
+0.1
+0.0
-0.3
+0.1
+0.3
stress
KB with Curcumin 10 mM
-0.2
-0.1
+0.6
+0.0
+0.0
stress
KB with Conessine 10 mM
-0.1
+0.2
-0.1
+0.4
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
-0.2
+0.4
+0.2
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.1
+0.2
+0.6
-0.1
-0.4
kb
KB
-0.2
+0.1
+0.4
+0.1
+0.0
stress
KB with Erythromycin 6.25 ug/ml
-0.0
+0.2
-0.3
+0.2
+0.4
stress
KB with Anethole 10 mM
-0.1
+0.1
+0.5
+0.3
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.1
+0.4
+0.5
+0.1
-0.4
stress
KB with Helenine 10 mM
-0.1
-0.2
+0.4
+0.3
+0.2
stress
KB with Harmol 10 mM
-0.1
+0.1
+0.4
+0.2
+0.2
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.2
+0.1
+0.2
+0.3
+0.1
stress
KB with Sclareolide 10 mM
+0.0
+0.1
+0.4
+0.3
+0.0
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.1
+0.0
+0.3
+0.4
+0.2
stress
KB with Rotenone 0.125 mg/ml
+0.1
+0.0
+0.3
+0.2
+0.3
stress
KB with Flavone 0.125 mg/ml
+0.1
-0.0
+0.6
+0.1
+0.2
stress
KB with Oxedrine 10 mM
+0.1
+0.4
+0.3
+0.4
+0.1
in planta
Green bean; epiphytic
-0.2
+0.3
+0.2
+0.2
+1.1
stress
KB with Carbenicillin 3.1 ug/ml
+0.1
+0.3
+0.5
+0.5
+0.4
in planta
Green bean; epiphytic
-0.0
+0.4
+0.1
+0.3
+1.1
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