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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4020 and Psyr_4021 are separated by 180 nucleotides
Psyr_4021 and Psyr_4022 overlap by 4 nucleotides
Psyr_4022 and Psyr_4023 overlap by 14 nucleotides
Psyr_4023 and Psyr_4024 overlap by 4 nucleotides
Psyr_4020: Psyr_4020 - Exodeoxyribonuclease I subunit C, at 4,787,147 to 4,788,577
_4020
Psyr_4021: Psyr_4021 - RDD, at 4,788,758 to 4,789,483
_4021
Psyr_4022: Psyr_4022 - integral membrane protein, at 4,789,480 to 4,790,460
_4022
Psyr_4023: Psyr_4023 - conserved hypothetical protein, at 4,790,447 to 4,792,036
_4023
Psyr_4024: Psyr_4024 - conserved hypothetical protein, at 4,792,033 to 4,793,250
_4024
Group
Condition
Psyr
_4020
Psyr
_4021
Psyr
_4022
Psyr
_4023
Psyr
_4024
stress
KB with Veratrine 10 mM
-0.3
-0.1
-0.1
-0.2
-0.3
stress
KB with Avocatin A 10 mM
-0.3
-0.1
-0.2
-0.1
-0.2
stress
KB with Avocadyne 10 mM
-0.5
+0.1
-0.0
-0.2
-0.2
stress
KB with Diallyl sulfide 10 mM
-0.2
-0.3
-0.0
-0.1
-0.1
stress
KB with Totarol 10 mM
-0.4
+0.1
-0.0
-0.2
-0.2
stress
KB with Rotenone 0.25 mg/ml
-0.3
-0.3
-0.1
+0.1
-0.0
stress
KB with Cotarnine Chloride 10 mM
-0.5
-0.2
+0.1
+0.1
-0.1
stress
KB with Palmatine 10 mM
-0.4
+0.0
-0.2
-0.1
+0.1
in planta
epiphytic; Lima bean
-0.4
-0.2
-0.1
-0.2
+0.3
in planta
apoplastic; Green bean; 6 days
-0.3
-0.2
-0.1
+0.0
+0.1
stress
KB with Usnic Acid 10 mM
-0.4
-0.3
+0.1
-0.0
+0.0
stress
KB with Acriflavine 1.25 ug/ml
-0.7
+0.1
+0.0
-0.0
+0.2
stress
KB with Erythromycin 6.25 ug/ml
-0.6
-0.0
+0.0
-0.0
+0.2
stress
KB with Rotenone 0.125 mg/ml
-0.2
-0.4
+0.1
+0.1
+0.0
stress
KB with Oxonitine 10 mM
-0.4
-0.0
+0.1
+0.1
-0.2
stress
KB with Harmine 10 mM
-0.3
-0.2
+0.0
-0.1
+0.3
in planta
apoplastic, chopping recovery; Green bean
-0.6
+0.0
+0.1
+0.0
+0.1
stress
KB with Phloretin 125 ug/ml
-0.5
-0.1
+0.1
+0.0
+0.2
stress
KB with Avocadene 10 mM
-0.3
-0.2
+0.3
+0.1
-0.0
in planta
Green bean; epiphytic
-0.4
+0.2
+0.0
-0.2
+0.3
in planta
Green bean; epiphytic
-0.4
-0.1
+0.0
-0.0
+0.4
stress
KB with Acridine orange 3.125 ug/ml
-0.5
-0.0
+0.2
+0.0
+0.2
stress
KB with Berberine 15.6 ug/ml
-0.5
+0.2
-0.0
-0.1
+0.3
in planta
apoplastic, chopping recovery; Green bean
-0.4
+0.1
+0.2
-0.0
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.6
+0.3
+0.2
+0.1
+0.2
stress
KB with Piperacillin 0.775 ug/ml
-0.3
+0.3
+0.0
-0.0
+0.2
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
-0.3
-0.1
+0.2
+0.2
+0.1
in planta
apoplastic, chopping recovery; Green bean
-0.5
+0.1
+0.2
-0.1
+0.4
stress
KB with Carbenicillin 3.1 ug/ml
+0.1
-0.1
+0.1
+0.1
+0.3
stress
KB with Oxedrine 10 mM
-0.1
+0.1
+0.1
+0.1
+0.4
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