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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3985 and Psyr_3986 are separated by 118 nucleotides
Psyr_3986 and Psyr_3987 are separated by 24 nucleotides
Psyr_3987 and Psyr_3988 are separated by 151 nucleotides
Psyr_3988 and Psyr_3989 are separated by 296 nucleotides
Psyr_3985: Psyr_3985 - Pectate lyase/Amb allergen, at 4,743,013 to 4,744,278
_3985
Psyr_3986: Psyr_3986 - GCN5-related N-acetyltransferase, at 4,744,397 to 4,744,843
_3986
Psyr_3987: Psyr_3987 - Iron-containing alcohol dehydrogenase, at 4,744,868 to 4,746,016
_3987
Psyr_3988: Psyr_3988 - conserved hypothetical protein, at 4,746,168 to 4,747,388
_3988
Psyr_3989: Psyr_3989 - hypothetical protein, at 4,747,685 to 4,748,905
_3989
Group
Condition
Psyr
_3985
Psyr
_3986
Psyr
_3987
Psyr
_3988
Psyr
_3989
stress
KB with Mitomycin C 0.05 ug/ml
-0.3
-0.7
+0.1
-0.0
-0.6
stress
KB with Levodopa 10 mM
-0.4
-0.5
-0.5
-0.1
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.4
-0.4
-0.3
+0.1
stress
KB with Acridine orange 3.125 ug/ml
-0.3
-0.7
-0.1
+0.2
-0.3
stress
KB with Veratrine 10 mM
-0.0
-0.7
-0.3
+0.1
-0.3
in planta
apoplastic, chopping recovery; Green bean
-0.4
-0.3
-0.5
-0.1
+0.2
stress
KB with Lupeol 10 mM
-0.1
-0.6
-0.2
+0.0
-0.2
stress
KB with L-alliin 10 mM
-0.1
-0.9
-0.1
+0.1
-0.0
stress
KB with Curcumin 10 mM
-0.0
-0.5
-0.3
+0.0
-0.1
stress
KB with Totarol 10 mM
-0.1
-1.0
+0.2
+0.1
+0.0
stress
KB with Nitrofurantoin 0.0625 mg/ml
-0.1
-0.4
+0.3
-0.4
-0.1
stress
KB with Piperine 10 mM
-0.0
-0.6
-0.4
+0.3
-0.0
stress
KB with Avocadyne 10 mM
-0.2
-0.7
+0.1
+0.2
+0.0
kb
KB
-0.2
-0.4
-0.1
+0.1
-0.1
stress
KB with Carbenicillin 3.1 ug/ml
-0.2
+0.2
+0.2
-0.4
-0.4
stress
KB with 4-acetoxyphenol 10 mM
-0.0
-0.6
+0.1
+0.1
-0.2
stress
KB with Nonanoic 10 mM
-0.0
-0.3
-0.4
+0.2
-0.1
stress
KB with 4-hydroxychalcone 10 mM
-0.0
-0.6
-0.3
+0.4
-0.1
in planta
epiphytic; Lima bean
-0.3
-0.1
-0.3
+0.4
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
-0.2
+0.3
-0.4
-0.0
stress
KB with Novobiocin 7.75 ug/ml
-0.6
+0.5
-0.0
+0.0
-0.1
stress
KB with Harmol Hydrochloride 10 mM
-0.0
+0.2
-0.3
+0.2
-0.2
in planta
epiphytic; Lima bean
+0.1
-0.7
+0.0
+0.2
+0.2
stress
KB with Conessine 10 mM
-0.1
-0.4
-0.1
+0.3
+0.2
stress
KB with Palmatine chloride 10 mM
-0.0
-0.2
-0.1
+0.5
+0.1
stress
KB with Tetracycline 0.0015 ug/ml
+0.1
+0.3
+0.2
+0.3
-0.4
stress
KB with Isosafrole 10 mM
+0.2
+0.4
-0.0
+0.2
-0.3
stress
KB with Piperacillin 0.775 ug/ml
-0.0
+0.3
+0.3
+0.2
-0.2
stress
KB with Methanol 5 vol%
+0.2
+0.6
-0.1
+0.4
-0.0
in planta
apoplastic; Green bean; 6 days
-0.1
+0.3
+0.4
+0.4
+0.0
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