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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3974 and Psyr_3975 overlap by 4 nucleotides
Psyr_3975 and Psyr_3976 are separated by 11 nucleotides
Psyr_3976 and Psyr_3977 are separated by 109 nucleotides
Psyr_3977 and Psyr_3978 are separated by 35 nucleotides
Psyr_3974: Psyr_3974 - ABC transporter, at 4,721,850 to 4,722,632
_3974
Psyr_3975: Psyr_3975 - conserved hypothetical protein, at 4,722,629 to 4,723,354
_3975
Psyr_3976: Psyr_3976 - conserved hypothetical protein, at 4,723,366 to 4,723,983
_3976
Psyr_3977: Psyr_3977 - Urea amidolyase-related protein, at 4,724,093 to 4,728,559
_3977
Psyr_3978: Psyr_3978 - Amidase, at 4,728,595 to 4,730,409
_3978
Group
Condition
Psyr
_3974
Psyr
_3975
Psyr
_3976
Psyr
_3977
Psyr
_3978
stress
KB with Harmine 10 mM
-0.8
-0.3
-0.0
+0.0
+0.3
stress
KB with Mitomycin C 0.05 ug/ml
+0.1
-0.3
-0.8
+0.2
+0.2
stress
KB with Cantharidin 10 mM
-0.8
-0.1
+0.1
-0.0
+0.1
in planta
apoplastic, chopping recovery; Green bean
-0.3
+0.5
-0.3
+0.1
-0.5
in planta
apoplastic, chopping recovery; Green bean
+0.4
+0.0
-0.0
-0.0
-0.9
stress
KB with Flavone 0.125 mg/ml
-0.2
+0.4
-0.1
+0.1
+0.5
stress
KB with Avocatin A 10 mM
+0.5
+0.4
+0.2
+0.0
-0.0
stress
KB with Emodin 10 mM
+0.1
+0.8
+0.2
-0.0
+0.1
stress
KB with 4-hydroxychalcone 10 mM
+0.5
+0.7
-0.0
-0.1
+0.1
stress
KB with Auraptene 10 mM
+0.2
+0.5
+0.2
+0.0
+0.3
stress
KB with Palmatine 10 mM
+0.4
+0.7
+0.0
+0.1
+0.1
stress
KB with Lupeol 10 mM
+0.8
+0.5
+0.1
+0.1
-0.1
stress
KB with Palmatine chloride 10 mM
+0.3
+0.5
+0.2
+0.0
+0.3
stress
KB with Anethole 10 mM
+0.5
+0.4
+0.2
+0.0
+0.2
stress
KB with Lawsone 10 mM
+0.7
+0.3
+0.2
-0.0
+0.2
stress
KB with 4-acetoxyphenol 10 mM
+0.9
+0.3
-0.0
+0.0
+0.2
stress
KB with Curcumin 10 mM
+0.6
+0.6
+0.1
+0.0
+0.2
stress
KB with Diallyl sulfide 10 mM
+0.7
+0.4
+0.2
+0.1
+0.1
stress
KB with Totarol 10 mM
+0.8
+0.6
+0.2
-0.0
-0.1
stress
KB with Harmol 10 mM
+0.7
+0.9
+0.1
+0.1
-0.1
stress
KB with Avocadyne 10 mM
+0.5
+0.7
+0.3
+0.1
+0.1
stress
KB with Biochanin a diacetate 10 mM
+0.9
+0.4
+0.4
+0.1
-0.1
stress
KB with Piperine 10 mM
+0.8
+0.7
+0.1
+0.0
+0.2
stress
KB with Terpene 10 mM
+0.9
+0.6
+0.2
+0.0
+0.1
stress
KB with Chrysophanol 10 mM
+0.8
+0.2
+0.4
+0.2
+0.2
stress
KB with Physcion 10 mM
+0.7
+0.7
+0.1
+0.1
+0.1
stress
KB with Helenine 10 mM
+0.9
+0.6
+0.2
+0.1
+0.1
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.8
+0.5
+0.2
+0.2
+0.2
stress
KB with Veratrine 10 mM
+1.1
+0.6
+0.1
+0.1
+0.2
stress
KB with Conessine 10 mM
+0.9
+0.8
+0.2
+0.0
+0.1
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