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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3888 and Psyr_3889 are separated by 106 nucleotides
Psyr_3889 and Psyr_3890 are separated by 156 nucleotides
Psyr_3890 and Psyr_3891 are separated by 1271 nucleotides
Psyr_3891 and Psyr_3892 are separated by 383 nucleotides
Psyr_3888: Psyr_3888 - endonuclease III / DNA-(apurinic or apyrimidinic site) lyase, at 4,629,580 to 4,630,218
_3888
Psyr_3889: Psyr_3889 - conserved hypothetical protein, at 4,630,325 to 4,630,507
_3889
Psyr_3890: Psyr_3890 - regulatory protein, LuxR:Response regulator receiver, at 4,630,664 to 4,631,290
_3890
Psyr_3891: Psyr_3891 - hypothetical protein, at 4,632,562 to 4,633,089
_3891
Psyr_3892: Psyr_3892 - argininosuccinate synthase, at 4,633,473 to 4,634,690
_3892
Group
Condition
Psyr
_3888
Psyr
_3889
Psyr
_3890
Psyr
_3891
Psyr
_3892
stress
KB with Levodopa 10 mM
-0.1
-0.6
-0.2
-0.2
N.D.
stress
KB with Isosafrole 10 mM
-0.1
-0.7
-0.0
-0.3
N.D.
stress
KB with d-limonene 10 mM
-0.1
-0.3
+0.0
-0.6
N.D.
in planta
apoplastic; Green bean; 6 days
+0.1
-0.0
-0.3
-0.6
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.0
-0.4
+0.1
-0.4
N.D.
stress
KB with Curcumin 10 mM
+0.1
-0.1
-0.3
-0.4
N.D.
stress
KB with capsaicin 0.125 mg/ml
+0.1
-1.0
+0.0
+0.2
N.D.
stress
KB with Sinomenine 10 mM
-0.0
-0.4
+0.1
-0.4
N.D.
stress
KB with Phloretin 125 ug/ml
-0.0
-0.3
-0.4
+0.1
N.D.
stress
KB with Anabasine Hydrochloride 10 mM
+0.2
-0.5
-0.1
-0.2
N.D.
stress
KB with Novobiocin 7.75 ug/ml
+0.1
+0.1
-0.1
-0.6
N.D.
stress
KB with Trimethoprim 15.6 ug/ml
+0.0
-0.4
-0.3
+0.3
N.D.
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.3
-0.2
-0.2
-0.3
N.D.
stress
KB with Diallyl sulfide 10 mM
-0.0
+0.3
-0.1
-0.6
N.D.
stress
KB with Piperacillin 0.775 ug/ml
+0.1
-0.3
+0.1
-0.3
N.D.
stress
KB with Usnic Acid 10 mM
+0.2
-0.3
+0.0
-0.2
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.2
-0.4
+0.0
-0.2
N.D.
stress
KB with Berberine 15.6 ug/ml
+0.1
-0.7
-0.2
+0.4
N.D.
in planta
apoplastic; Green bean; 6 days
+0.2
+0.2
-0.3
-0.4
N.D.
stress
KB with Tetracycline 0.0015 ug/ml
+0.0
-0.5
-0.0
+0.3
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.4
+0.3
-0.1
-0.0
N.D.
stress
KB with Ampicillin 0.775 ug/ml
+0.2
-0.4
-0.0
+0.2
N.D.
stress
KB with 4-hydroxychalcone 10 mM
-0.3
+0.1
-0.2
+0.3
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.4
+0.3
+0.1
-0.1
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.3
-0.2
+0.1
N.D.
stress
KB with Mitomycin C 0.05 ug/ml
-0.1
+0.2
+0.4
-0.4
N.D.
stress
KB with Escin 10 mM
+0.1
+0.1
+0.4
-0.4
N.D.
in planta
epiphytic; Lima bean
+0.3
+0.2
-0.0
-0.4
N.D.
in planta
epiphytic; Lima bean
+0.3
+0.5
+0.1
-0.3
N.D.
stress
KB with Carbenicillin 3.1 ug/ml
+0.1
+0.3
+0.1
+0.3
N.D.
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