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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3872 and Psyr_3873 overlap by 4 nucleotides
Psyr_3873 and Psyr_3874 are separated by 343 nucleotides
Psyr_3874 and Psyr_3875 are separated by 77 nucleotides
Psyr_3875 and Psyr_3876 overlap by 4 nucleotides
Psyr_3872: Psyr_3872 - conserved hypothetical protein, at 4,612,321 to 4,613,367
_3872
Psyr_3873: Psyr_3873 - ATP-dependent DNA ligase:ATP-dependent DNA ligase, at 4,613,364 to 4,615,067
_3873
Psyr_3874: Psyr_3874 - amino acid ABC transporter substrate-binding protein, PAAT family, at 4,615,411 to 4,616,193
_3874
Psyr_3875: Psyr_3875 - amino acid ABC transporter membrane protein 1, PAAT family, at 4,616,271 to 4,616,999
_3875
Psyr_3876: Psyr_3876 - amino acid ABC transporter membrane protein 2, PAAT family, at 4,616,996 to 4,617,706
_3876
Group
Condition
Psyr
_3872
Psyr
_3873
Psyr
_3874
Psyr
_3875
Psyr
_3876
stress
KB with Piperine 10 mM
-0.1
-0.8
-0.5
-0.3
-0.1
stress
KB with Biochanin a diacetate 10 mM
+0.1
-0.3
-0.4
-0.4
-0.1
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.0
-0.0
-0.4
-0.4
-0.2
stress
KB with Anethole 10 mM
-0.0
-0.3
-0.2
-0.4
-0.0
stress
KB with Avocatin A 10 mM
+0.1
-0.2
-0.6
-0.1
-0.1
stress
KB with Sclareolide 10 mM
-0.0
-0.4
-0.3
-0.2
-0.1
stress
KB with Carbenicillin 3.1 ug/ml
+0.3
-0.2
-0.1
-1.0
+0.2
stress
KB with Harmol 10 mM
+0.1
-0.6
+0.0
-0.1
-0.2
stress
KB with Nonanoic 10 mM
-0.0
-0.4
-0.3
+0.1
-0.2
stress
KB with Veratrine 10 mM
+0.2
-0.3
-0.3
-0.2
-0.2
stress
KB with Prenyletin 10 mM
-0.2
-0.2
-0.3
+0.1
-0.2
stress
KB with Paclitaxel 10 mM
-0.2
-0.3
-0.2
+0.2
-0.0
stress
KB with Lupeol 10 mM
-0.0
-0.1
-0.4
+0.2
-0.2
in planta
apoplastic; Green bean; 6 days
-0.2
-0.4
-0.0
+0.2
+0.0
stress
KB with Piperic 10 mM
+0.2
-0.4
-0.2
+0.1
-0.1
stress
KB with Palmatine 10 mM
-0.2
-0.3
+0.2
+0.2
-0.2
in planta
apoplastic; Green bean; 6 days
-0.0
-0.6
-0.1
+0.3
+0.1
stress
KB with Mitomycin C 0.05 ug/ml
+0.2
+0.3
-0.7
-0.3
+0.2
stress
KB with Escin 10 mM
+0.2
-0.3
-0.2
-0.0
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.0
-0.2
-0.2
+0.2
+0.2
stress
KB with Piperacillin 0.775 ug/ml
+0.2
-0.2
+0.3
-0.2
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.0
-0.4
-0.0
+0.3
+0.3
in planta
epiphytic; Lima bean
+0.3
+0.6
-0.5
-0.2
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.3
-0.0
+0.4
+0.4
stress
KB with capsaicin 0.125 mg/ml
+0.2
+0.3
+0.3
+0.1
-0.0
stress
KB with Harmine 10 mM
+0.1
+0.4
+0.2
-0.1
+0.1
stress
KB with Flavone 0.125 mg/ml
+0.1
+0.3
+0.3
+0.1
+0.1
stress
KB with Harmol Hydrochloride 10 mM
-0.0
+0.5
+0.3
+0.2
+0.2
stress
KB with Tetracycline 0.0015 ug/ml
+0.0
+0.4
+0.5
+0.3
-0.0
in planta
epiphytic; Lima bean
+0.3
+0.5
+0.1
+0.2
+0.2
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