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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3869 and Psyr_3870 are separated by 158 nucleotides
Psyr_3870 and Psyr_3871 are separated by 232 nucleotides
Psyr_3871 and Psyr_3872 are separated by 670 nucleotides
Psyr_3872 and Psyr_3873 overlap by 4 nucleotides
Psyr_3869: Psyr_3869 - phage repressor protein, Serine peptidase, MEROPS family S24, at 4,607,928 to 4,608,584
_3869
Psyr_3870: Psyr_3870 - SEC-C motif protein, at 4,608,743 to 4,608,943
_3870
Psyr_3871: Psyr_3871 - Penicillin amidase, at 4,609,176 to 4,611,650
_3871
Psyr_3872: Psyr_3872 - conserved hypothetical protein, at 4,612,321 to 4,613,367
_3872
Psyr_3873: Psyr_3873 - ATP-dependent DNA ligase:ATP-dependent DNA ligase, at 4,613,364 to 4,615,067
_3873
Group
Condition
Psyr
_3869
Psyr
_3870
Psyr
_3871
Psyr
_3872
Psyr
_3873
stress
KB with Piperine 10 mM
N.D.
-0.0
-0.0
-0.1
-0.8
stress
KB with Erythromycin 6.25 ug/ml
N.D.
+0.0
-0.8
-0.0
-0.1
in planta
apoplastic; Green bean; 6 days
N.D.
-0.0
-0.2
-0.2
-0.4
stress
KB with Palmatine chloride 10 mM
N.D.
-0.1
-0.3
-0.1
-0.2
in planta
apoplastic; Green bean; 6 days
N.D.
+0.0
-0.0
-0.0
-0.6
stress
KB with Paclitaxel 10 mM
N.D.
+0.2
-0.1
-0.2
-0.3
stress
KB with Escin 10 mM
N.D.
-0.4
+0.2
+0.2
-0.3
stress
KB with Auraptene 10 mM
N.D.
+0.3
-0.2
+0.0
-0.4
stress
KB with Harmol 10 mM
N.D.
+0.3
-0.1
+0.1
-0.6
stress
KB with Totarol 10 mM
N.D.
+0.2
-0.0
-0.2
-0.2
stress
KB with Conessine 10 mM
N.D.
+0.1
-0.1
+0.1
-0.4
stress
KB with Palmatine 10 mM
N.D.
+0.3
-0.0
-0.2
-0.3
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.1
+0.1
+0.1
-0.3
stress
KB with Piperic 10 mM
N.D.
-0.1
+0.1
+0.2
-0.4
stress
KB with Chaulmoogric 10 mM
N.D.
+0.3
-0.3
-0.0
-0.2
stress
KB with Levodopa 10 mM
N.D.
+0.3
-0.0
-0.2
-0.3
kb
KB
N.D.
+0.2
+0.0
-0.0
-0.4
stress
KB with Anethole 10 mM
N.D.
+0.4
-0.2
-0.0
-0.3
stress
KB with d-limonene 10 mM
N.D.
+0.4
-0.0
+0.0
-0.4
stress
KB with Chrysophanol 10 mM
N.D.
+0.3
-0.2
+0.1
-0.2
stress
KB with 4-hydroxychalcone 10 mM
N.D.
+0.4
-0.0
-0.0
-0.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
+0.3
+0.1
-0.1
-0.2
stress
KB with Mitomycin C 0.05 ug/ml
N.D.
-0.4
+0.1
+0.2
+0.3
stress
KB with capsaicin 0.125 mg/ml
N.D.
-0.0
-0.2
+0.2
+0.3
stress
KB with Acriflavine 1.25 ug/ml
N.D.
+0.3
-0.4
+0.2
+0.2
stress
KB with Cantharidin 10 mM
N.D.
+0.1
-0.1
+0.0
+0.4
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
+0.3
+0.1
+0.3
-0.2
stress
KB with Harmine 10 mM
N.D.
+0.2
-0.0
+0.1
+0.4
in planta
epiphytic; Lima bean
N.D.
-0.2
-0.0
+0.3
+0.6
in planta
epiphytic; Lima bean
N.D.
-0.1
+0.1
+0.3
+0.5
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