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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3786 and Psyr_3787 are separated by 608 nucleotides
Psyr_3787 and Psyr_3788 are separated by 144 nucleotides
Psyr_3788 and Psyr_3789 are separated by 69 nucleotides
Psyr_3789 and Psyr_3790 are separated by 608 nucleotides
Psyr_3786: Psyr_3786 - RNA binding S1, at 4,501,896 to 4,502,732
_3786
Psyr_3787: Psyr_3787 - conserved hypothetical protein, at 4,503,341 to 4,503,907
_3787
Psyr_3788: Psyr_3788 - Conserved hypothetical protein 2001, at 4,504,052 to 4,504,780
_3788
Psyr_3789: Psyr_3789 - lipoprotein, putative, at 4,504,850 to 4,505,713
_3789
Psyr_3790: Psyr_3790 - conserved hypothetical protein, at 4,506,322 to 4,506,624
_3790
Group
Condition
Psyr
_3786
Psyr
_3787
Psyr
_3788
Psyr
_3789
Psyr
_3790
stress
KB with Mitomycin C 0.05 ug/ml
-0.6
-0.7
-0.2
+0.0
+0.3
stress
KB with Acridine orange 3.125 ug/ml
-0.4
-1.1
-0.0
+0.0
+0.4
in planta
epiphytic; Lima bean
-0.0
+0.2
-0.5
-0.5
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.5
-0.1
-0.1
-0.4
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.2
-0.2
-0.0
-0.6
+0.4
stress
KB with Methanol 5 vol%
-0.2
-0.4
-0.2
+0.0
+0.2
stress
KB with Carbenicillin 3.1 ug/ml
-0.6
-0.7
-0.2
+0.5
+0.4
stress
KB with D-Salicin 240 ug/ml
-0.1
-0.6
-0.2
+0.1
+0.2
stress
KB with Strychnine Sulfate 10 mM
-0.2
-0.5
-0.1
+0.2
+0.1
stress
KB with Berberine 15.6 ug/ml
+0.2
-0.3
-0.1
-0.2
-0.2
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.4
-0.5
+0.0
+0.3
+0.2
stress
KB with Palmatine 10 mM
+0.3
-0.1
-0.0
-0.5
+0.2
stress
KB with Paclitaxel 10 mM
-0.1
-0.2
-0.2
+0.3
+0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.0
-0.0
-0.2
+0.5
-0.2
stress
KB with Escin 10 mM
-0.4
-0.1
-0.0
+0.3
+0.3
in planta
apoplastic; Green bean; 6 days
+0.1
-0.3
+0.2
-0.2
+0.3
stress
KB with Chaulmoogric 10 mM
+0.3
-0.5
-0.0
+0.4
-0.1
stress
KB with Levodopa 10 mM
+0.1
-0.4
+0.1
+0.4
+0.2
stress
KB with Auraptene 10 mM
+0.2
-0.3
-0.0
+0.1
+0.4
stress
KB with Novobiocin 7.75 ug/ml
-0.1
-0.0
-0.2
+0.4
+0.4
stress
KB with Piperic 10 mM
+0.3
-0.1
-0.2
+0.1
+0.4
stress
KB with L-alliin 10 mM
+0.1
-0.1
+0.2
+0.1
+0.4
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.1
+0.1
-0.1
+0.2
+0.5
stress
KB with Piperine 10 mM
+0.4
-0.0
-0.1
+0.5
+0.2
stress
KB with Harmol 10 mM
+0.4
-0.0
+0.1
+0.2
+0.3
stress
KB with Helenine 10 mM
+0.2
+0.1
-0.0
+0.2
+0.4
stress
KB with Nonanoic 10 mM
+0.2
+0.3
-0.1
+0.3
+0.2
stress
KB with Veratrine 10 mM
+0.0
+0.0
+0.0
+0.4
+0.6
stress
KB with Gossypetin 10 mM
+0.5
+0.1
-0.2
+0.3
+0.4
kb
KB
+0.5
+0.3
+0.1
+0.3
+0.0
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