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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3619 and Psyr_3620 are separated by 69 nucleotides
Psyr_3620 and Psyr_3621 are separated by 135 nucleotides
Psyr_3621 and Psyr_3622 are separated by 169 nucleotides
Psyr_3622 and Psyr_3623 are separated by 27 nucleotides
Psyr_3619: Psyr_3619 - Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal, at 4,303,040 to 4,304,713
_3619
Psyr_3620: Psyr_3620 - hypothetical protein, at 4,304,783 to 4,305,031
_3620
Psyr_3621: Psyr_3621 - conserved hypothetical protein, at 4,305,167 to 4,305,928
_3621
Psyr_3622: Psyr_3622 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase, at 4,306,098 to 4,307,444
_3622
Psyr_3623: Psyr_3623 - Protein of unknown function DUF1127, at 4,307,472 to 4,307,705
_3623
Group
Condition
Psyr
_3619
Psyr
_3620
Psyr
_3621
Psyr
_3622
Psyr
_3623
stress
KB with Sclareolide 10 mM
N.D.
N.D.
-0.1
+0.3
-3.4
stress
KB with Paclitaxel 10 mM
N.D.
N.D.
-0.3
+0.3
-2.1
stress
KB with Auraptene 10 mM
N.D.
N.D.
-0.2
+0.1
-1.8
stress
KB with 4-acetoxyphenol 10 mM
N.D.
N.D.
-0.3
+0.4
-1.9
stress
KB with Chaulmoogric 10 mM
N.D.
N.D.
-0.1
-0.0
-1.6
stress
KB with Mitomycin C 0.05 ug/ml
N.D.
N.D.
-0.5
+0.2
-1.4
stress
KB with Terpene 10 mM
N.D.
N.D.
-0.2
+0.1
-1.6
kb
KB
N.D.
N.D.
-0.1
+0.3
-1.8
kb
KB
N.D.
N.D.
-0.5
+0.3
-1.3
stress
KB with Totarol 10 mM
N.D.
N.D.
-0.3
-0.3
-0.9
stress
KB with Lawsone 10 mM
N.D.
N.D.
-0.3
+0.4
-1.6
stress
KB with Conessine 10 mM
N.D.
N.D.
-0.2
-0.3
-0.9
stress
KB with Gossypetin 10 mM
N.D.
N.D.
-0.1
+0.2
-1.4
stress
KB with Palmatine chloride 10 mM
N.D.
N.D.
-0.4
+0.1
-0.9
stress
KB with Veratrine 10 mM
N.D.
N.D.
-0.0
+0.2
-1.3
stress
KB with Diallyl sulfide 10 mM
N.D.
N.D.
-0.4
+0.4
-1.1
stress
KB with L-alliin 10 mM
N.D.
N.D.
-0.2
+0.3
-1.0
stress
KB with Solanesol 10 mM
N.D.
N.D.
-0.1
+0.4
-1.1
stress
KB with Chrysophanol 10 mM
N.D.
N.D.
-0.3
+0.5
-1.0
stress
KB with Prenyletin 10 mM
N.D.
N.D.
-0.2
+0.4
-1.0
stress
KB with Oxonitine 10 mM
N.D.
N.D.
+0.1
+0.1
+1.1
stress
KB with Rifampicin 0.1 mg/ml
N.D.
N.D.
-0.0
-0.0
+1.4
kb
KB
N.D.
N.D.
-0.1
+0.0
+1.5
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
N.D.
+0.1
+0.0
+1.4
stress
KB with Quercetin 360 ug/ml
N.D.
N.D.
+0.1
+0.0
+1.4
in planta
apoplastic, chopping recovery; Green bean
N.D.
N.D.
-0.4
+0.4
+1.5
in planta
apoplastic, chopping recovery; Green bean
N.D.
N.D.
-0.2
+0.4
+1.5
in planta
apoplastic, chopping recovery; Green bean
N.D.
N.D.
-0.3
+0.4
+1.6
in planta
apoplastic, chopping recovery; Green bean
N.D.
N.D.
-0.4
+0.5
+1.9
stress
KB with capsaicin 0.25 mg/ml
N.D.
N.D.
+0.2
-0.0
+1.9
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