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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3474 and Psyr_3475 are separated by 84 nucleotides
Psyr_3475 and Psyr_3476 are separated by 46 nucleotides
Psyr_3476 and Psyr_3477 are separated by 475 nucleotides
Psyr_3477 and Psyr_3478 are separated by 197 nucleotides
Psyr_3474: Psyr_3474 - Flagellar L-ring protein, at 4,144,839 to 4,145,552
_3474
Psyr_3475: Psyr_3475 - Flagellar basal body rod protein:Protein of unknown function DUF1078, at 4,145,637 to 4,146,425
_3475
Psyr_3476: Psyr_3476 - Flagellar basal body rod protein:Protein of unknown function DUF1078, at 4,146,472 to 4,147,212
_3476
Psyr_3477: Psyr_3477 - Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE, at 4,147,688 to 4,149,436
_3477
Psyr_3478: Psyr_3478 - Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE, at 4,149,634 to 4,150,962
_3478
Group
Condition
Psyr
_3474
Psyr
_3475
Psyr
_3476
Psyr
_3477
Psyr
_3478
stress
KB with capsaicin 0.25 mg/ml
-0.3
N.D.
-0.7
-0.0
-0.1
stress
KB with Piperacillin 0.775 ug/ml
-0.3
N.D.
-0.6
+0.1
-0.2
stress
KB with Conessine 10 mM
+0.2
N.D.
-0.6
-0.1
-0.5
stress
KB with Harmol 10 mM
+0.3
N.D.
-1.1
-0.1
+0.0
stress
KB with Oxonitine 10 mM
+0.1
N.D.
-0.8
-0.2
+0.2
stress
KB with Palmatine 10 mM
+0.5
N.D.
-0.6
-0.2
-0.0
stress
KB with Diallyl sulfide 10 mM
+0.3
N.D.
+0.5
-0.2
-0.2
stress
KB with Veratrine 10 mM
+0.5
N.D.
+0.4
-0.1
-0.3
stress
KB with Chaulmoogric 10 mM
+0.4
N.D.
+0.7
-0.3
-0.2
stress
KB with Solanesol 10 mM
+0.3
N.D.
+0.8
-0.1
-0.2
in planta
apoplastic; Green bean; 6 days
+0.1
N.D.
+0.7
-0.1
+0.2
stress
KB with Avocadyne 10 mM
+0.2
N.D.
+0.9
-0.2
-0.1
stress
KB with Piperine 10 mM
+0.5
N.D.
+0.7
-0.2
-0.1
in planta
epiphytic; Lima bean
+0.6
N.D.
-0.3
+0.1
+0.6
stress
KB with Mitomycin C 0.05 ug/ml
+0.6
N.D.
+0.6
-0.2
-0.0
stress
KB with Palmatine chloride 10 mM
+0.6
N.D.
+0.6
-0.1
-0.1
kb
KB
+0.3
N.D.
+0.9
-0.1
-0.1
stress
KB with Terpene 10 mM
+0.4
N.D.
+0.8
-0.2
+0.0
stress
KB with Avocatin A 10 mM
+0.4
N.D.
+1.0
-0.2
-0.1
stress
KB with Lawsone 10 mM
+0.4
N.D.
+0.8
-0.0
-0.1
stress
KB with Chrysophanol 10 mM
+0.5
N.D.
+0.5
-0.0
+0.2
stress
KB with Prenyletin 10 mM
+0.2
N.D.
+1.1
-0.1
-0.0
in planta
apoplastic, chopping recovery; Green bean
+0.1
N.D.
+0.8
+0.1
+0.2
stress
KB with Helenine 10 mM
+0.4
N.D.
+1.0
-0.2
+0.0
stress
KB with Piperic 10 mM
+0.3
N.D.
+1.1
-0.1
+0.0
stress
KB with Acriflavine 1.25 ug/ml
+0.2
N.D.
+1.2
-0.2
+0.3
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.6
N.D.
+1.1
-0.2
-0.1
stress
KB with Auraptene 10 mM
+0.3
N.D.
+1.4
+0.0
+0.1
in planta
Green bean; epiphytic
+0.9
N.D.
+0.4
-0.0
+1.2
in planta
Green bean; epiphytic
+1.1
N.D.
+0.4
-0.2
+1.3
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