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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3372 and Psyr_3373 are separated by 74 nucleotides
Psyr_3373 and Psyr_3374 are separated by 170 nucleotides
Psyr_3374 and Psyr_3375 overlap by 22 nucleotides
Psyr_3375 and Psyr_3376 are separated by 19 nucleotides
Psyr_3372: Psyr_3372 - conserved hypothetical protein, at 4,031,471 to 4,032,091
_3372
Psyr_3373: Psyr_3373 - conserved hypothetical protein, at 4,032,166 to 4,032,771
_3373
Psyr_3374: Psyr_3374 - Heavy metal response regulator, at 4,032,942 to 4,033,631
_3374
Psyr_3375: Psyr_3375 - Heavy metal sensor kinase, at 4,033,610 to 4,034,998
_3375
Psyr_3376: Psyr_3376 - lyase, putative, at 4,035,018 to 4,035,686
_3376
Group
Condition
Psyr
_3372
Psyr
_3373
Psyr
_3374
Psyr
_3375
Psyr
_3376
stress
KB with 4-hydroxychalcone 10 mM
-0.1
-0.4
-2.1
-0.1
-0.1
stress
KB with Harmol 10 mM
+0.1
-0.7
-1.1
-0.2
-0.1
in planta
epiphytic; Lima bean
+0.2
-0.9
-0.6
+0.0
-0.1
stress
KB with Helenine 10 mM
-0.1
-0.3
-0.9
+0.1
-0.0
stress
KB with Veratrine 10 mM
+0.0
-0.4
-0.9
-0.1
+0.1
stress
KB with Piperic 10 mM
-0.3
-0.5
-0.4
-0.0
-0.0
stress
KB with Rotenone 0.25 mg/ml
-0.2
+0.4
-1.3
-0.1
-0.1
stress
KB with Avocadyne 10 mM
-0.0
-0.5
-0.7
-0.0
+0.0
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.3
-0.2
-0.7
+0.0
+0.1
stress
KB with Palmatine 10 mM
+0.2
-0.3
-0.7
-0.0
-0.3
stress
KB with Paclitaxel 10 mM
-0.1
-0.4
-0.5
-0.0
+0.1
stress
KB with Avocatin A 10 mM
+0.2
-0.0
-1.0
-0.2
+0.0
kb
KB
-0.0
-0.0
-1.0
-0.0
+0.1
stress
KB with Nonanoic 10 mM
-0.3
+0.1
-0.8
+0.0
+0.1
stress
KB with Piperine 10 mM
-0.0
-0.4
-0.7
-0.0
+0.2
stress
KB with Erythromycin 6.25 ug/ml
+0.2
-0.3
-0.6
-0.1
-0.1
stress
KB with d-limonene 10 mM
-0.5
+0.4
-0.8
-0.1
+0.1
stress
KB with Auraptene 10 mM
-0.1
+0.6
-1.3
-0.0
+0.0
stress
KB with Tetracycline 0.0015 ug/ml
+0.2
-0.4
-0.8
+0.1
+0.1
stress
KB with Lupeol 10 mM
-0.1
-0.6
-0.1
-0.1
+0.2
stress
KB with Chrysophanol 10 mM
-0.3
+0.3
-0.4
-0.1
-0.2
stress
KB with Physcion 10 mM
-0.2
+0.2
-0.7
+0.1
+0.1
stress
KB with Terpene 10 mM
-0.0
+0.5
-0.8
+0.0
-0.0
stress
KB with Carbenicillin 3.1 ug/ml
+0.4
+0.8
-0.9
-0.1
-0.4
stress
KB with Harmol Hydrochloride 10 mM
-0.2
-0.2
+0.7
-0.2
-0.3
stress
KB with Nitrofurantoin 0.0625 mg/ml
-0.2
-0.3
+0.6
+0.0
+0.2
stress
KB with Mitomycin C 0.05 ug/ml
-0.7
-0.0
+1.6
-0.1
-0.1
stress
KB with Harmine 10 mM
+0.0
-0.0
+1.1
-0.1
+0.1
stress
KB with Escin 10 mM
+0.2
+0.6
+0.7
-0.0
+0.0
stress
KB with Acridine orange 3.125 ug/ml
+0.1
-0.2
+2.5
-0.2
-0.3
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