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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3360 and Psyr_3361 are separated by 224 nucleotides
Psyr_3361 and Psyr_3362 are separated by 3 nucleotides
Psyr_3362 and Psyr_3363 are separated by 90 nucleotides
Psyr_3363 and Psyr_3364 are separated by 144 nucleotides
Psyr_3360: Psyr_3360 - Major facilitator superfamily, at 4,017,568 to 4,018,719
_3360
Psyr_3361: Psyr_3361 - RarD protein, at 4,018,944 to 4,019,828
_3361
Psyr_3362: Psyr_3362 - AFG1-like ATPase, at 4,019,832 to 4,020,947
_3362
Psyr_3363: Psyr_3363 - Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter, at 4,021,038 to 4,022,483
_3363
Psyr_3364: Psyr_3364 - Beta-lactamase, at 4,022,628 to 4,023,785
_3364
Group
Condition
Psyr
_3360
Psyr
_3361
Psyr
_3362
Psyr
_3363
Psyr
_3364
stress
KB with Palmatine 10 mM
-0.3
-0.4
-0.2
-0.3
-0.1
stress
KB with Biochanin a diacetate 10 mM
-0.4
-0.1
-0.2
-0.4
-0.0
stress
KB with Lawsone 10 mM
-0.3
-0.3
-0.0
-0.4
-0.1
stress
KB with Avocadyne 10 mM
-0.3
-0.2
-0.4
-0.2
-0.1
kb
KB
-0.2
-0.2
-0.2
-0.4
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.2
-0.2
-0.2
-0.3
+0.0
stress
KB with Avocatin A 10 mM
-0.3
-0.2
-0.1
-0.3
+0.1
stress
KB with Sclareolide 10 mM
-0.2
-0.1
-0.3
-0.1
-0.1
stress
KB with L-alliin 10 mM
-0.2
+0.0
-0.2
-0.5
+0.1
stress
KB with Flavone 0.125 mg/ml
-0.2
-0.3
-0.0
-0.2
+0.1
stress
KB with Anethole 10 mM
+0.0
-0.4
+0.0
-0.4
+0.0
stress
KB with Berberine 15.6 ug/ml
-0.4
-0.1
+0.0
-0.2
+0.1
stress
KB with Acriflavine 1.25 ug/ml
-0.2
-0.0
+0.1
-0.4
-0.0
stress
KB with 4-hydroxychalcone 10 mM
-0.3
+0.0
-0.3
-0.1
+0.1
stress
KB with Veratrine 10 mM
-0.2
-0.2
-0.2
-0.0
+0.1
stress
KB with Methanol 5 vol%
-0.2
-0.3
-0.2
+0.2
-0.0
stress
KB with Palmatine chloride 10 mM
-0.1
-0.4
+0.2
-0.2
+0.0
kb
KB
+0.2
-0.1
-0.2
-0.2
-0.0
stress
KB with Chaulmoogric 10 mM
-0.2
-0.2
-0.0
-0.2
+0.2
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.4
+0.0
+0.0
-0.2
+0.1
stress
KB with Gossypetin 10 mM
+0.0
+0.2
-0.2
-0.2
-0.1
in planta
apoplastic, chopping recovery; Green bean
-0.1
-0.2
+0.3
-0.2
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.0
+0.5
-0.4
+0.0
stress
KB with Carbenicillin 3.1 ug/ml
+0.1
-0.3
+0.3
+2.4
-2.7
stress
KB with Cotarnine Chloride 10 mM
-0.3
-0.2
+0.2
+0.2
-0.0
in planta
epiphytic; Lima bean
+0.2
-0.4
-0.1
+0.6
-0.3
in planta
epiphytic; Lima bean
-0.2
-0.1
+0.3
+0.5
-0.4
stress
KB with Mitomycin C 0.05 ug/ml
-0.0
-0.1
-0.2
+0.5
-0.0
in planta
apoplastic, chopping recovery; Green bean
-0.2
-0.1
+0.5
-0.1
+0.1
stress
KB with Acridine orange 3.125 ug/ml
-0.0
+0.2
-0.4
+0.4
+0.1
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