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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3250 and Psyr_3251 are separated by 111 nucleotides
Psyr_3251 and Psyr_3252 are separated by 194 nucleotides
Psyr_3252 and Psyr_3253 overlap by 1 nucleotides
Psyr_3253 and Psyr_3254 overlap by 4 nucleotides
Psyr_3250: Psyr_3250 - Helix-turn-helix motif protein, at 3,893,997 to 3,894,566
_3250
Psyr_3251: Psyr_3251 - Protein of unknown function DUF6, at 3,894,678 to 3,895,613
_3251
Psyr_3252: Psyr_3252 - multisubunit potassium/proton antiporter, PhaA subunit / multisubunit potassium/proton antiporter, PhaB subunit, at 3,895,808 to 3,898,726
_3252
Psyr_3253: Psyr_3253 - multisubunit potassium/proton antiporter, PhaC subunit, at 3,898,726 to 3,899,070
_3253
Psyr_3254: Psyr_3254 - multisubunit potassium/proton antiporter, PhaD subunit, at 3,899,067 to 3,900,752
_3254
Group
Condition
Psyr
_3250
Psyr
_3251
Psyr
_3252
Psyr
_3253
Psyr
_3254
stress
KB with Quercetin 360 ug/ml
-0.4
-0.4
-0.2
-0.3
-0.2
stress
KB with Novobiocin 7.75 ug/ml
-0.1
-0.3
-0.3
-0.2
-0.3
stress
KB with Veratrine 10 mM
-0.7
+0.1
-0.3
-0.0
-0.3
stress
KB with Methanol 5 vol%
-0.1
-0.2
+0.1
-0.3
-0.2
in planta
apoplastic, chopping recovery; Green bean
+0.0
-0.7
-0.4
+0.3
+0.1
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.7
-0.1
+0.2
+0.2
stress
KB with Strychnine Sulfate 10 mM
+0.2
-0.4
-0.0
-0.2
-0.2
stress
KB with Physcion 10 mM
-0.3
-0.5
+0.1
+0.2
+0.1
stress
KB with Levodopa 10 mM
-0.1
-0.2
+0.1
-0.4
+0.1
stress
KB with D-Salicin 240 ug/ml
+0.2
-0.5
-0.0
+0.1
-0.1
stress
KB with Harmine 10 mM
-0.3
+0.1
-0.1
+0.2
-0.1
stress
KB with Acridine orange 3.125 ug/ml
-0.9
-0.6
+0.2
+1.1
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.2
-0.4
-0.0
+0.4
+0.1
in planta
epiphytic; Lima bean
-0.2
+0.4
-0.1
-0.4
+0.2
in planta
apoplastic, chopping recovery; Green bean
-0.1
-0.4
-0.1
+0.3
+0.2
in planta
apoplastic; Green bean; 6 days
-0.1
+0.4
+0.1
-0.1
-0.3
stress
KB with Mitomycin C 0.05 ug/ml
-0.6
+0.1
-0.1
+0.6
+0.1
stress
KB with Palmatine 10 mM
+0.4
-0.3
-0.0
+0.2
-0.2
stress
KB with Chloramphenicol 1.55 ug/ml
+0.5
-0.3
+0.1
-0.2
+0.1
in planta
epiphytic; Lima bean
+0.4
-0.1
-0.5
+0.2
+0.2
stress
KB with Rifampicin 0.1 mg/ml
-0.2
-0.2
+0.2
+0.4
+0.0
stress
KB with Tetracycline 0.0015 ug/ml
-0.3
+0.3
+0.0
+0.2
+0.1
kb
KB
-0.1
-0.3
+0.2
+0.4
+0.2
stress
KB with Isosafrole 10 mM
+0.5
-0.1
-0.1
+0.2
-0.1
stress
KB with Gossypol-Acetic Acid Complex 10 mM
+0.4
+0.3
-0.1
-0.1
+0.0
in planta
apoplastic; Green bean; 6 days
+0.3
+0.3
-0.0
+0.3
-0.4
stress
KB with Piperine 10 mM
+0.5
+0.3
+0.0
-0.2
-0.0
stress
KB with Harmol 10 mM
-0.2
+0.1
+0.1
+0.6
-0.0
stress
KB with Oxedrine 10 mM
+0.3
+0.4
+0.1
-0.1
+0.1
stress
KB with Carbenicillin 3.1 ug/ml
+0.4
+0.3
+0.3
-0.3
+0.1
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