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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3182 and Psyr_3183 are separated by 117 nucleotides
Psyr_3183 and Psyr_3184 are separated by 30 nucleotides
Psyr_3184 and Psyr_3185 are separated by 225 nucleotides
Psyr_3185 and Psyr_3186 are separated by 618 nucleotides
Psyr_3182: Psyr_3182 - bacterial translation initiation factor 1 (bIF-1), at 3,810,426 to 3,810,644
_3182
Psyr_3183: Psyr_3183 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 3,810,762 to 3,813,035
_3183
Psyr_3184: Psyr_3184 - ATP-dependent Clp protease adaptor protein ClpS, at 3,813,066 to 3,813,428
_3184
Psyr_3185: Psyr_3185 - cold-shock DNA-binding protein family, at 3,813,654 to 3,813,932
_3185
Psyr_3186: Psyr_3186 - Isocitrate dehydrogenase NADP-dependent, monomeric type, at 3,814,551 to 3,816,773
_3186
Group
Condition
Psyr
_3182
Psyr
_3183
Psyr
_3184
Psyr
_3185
Psyr
_3186
stress
KB with Tetracycline 0.0015 ug/ml
N.D.
+0.2
-1.8
N.D.
N.D.
stress
KB with Anethole 10 mM
N.D.
-0.4
-0.7
N.D.
N.D.
stress
KB with Diallyl sulfide 10 mM
N.D.
-0.1
-1.0
N.D.
N.D.
kb
KB
N.D.
-0.3
-0.7
N.D.
N.D.
stress
KB with Totarol 10 mM
N.D.
-0.3
-0.7
N.D.
N.D.
stress
KB with Palmatine chloride 10 mM
N.D.
-0.4
-0.6
N.D.
N.D.
stress
KB with Nitrofurantoin 0.0625 mg/ml
N.D.
+0.0
-1.0
N.D.
N.D.
stress
KB with Emodin 10 mM
N.D.
-0.4
-0.6
N.D.
N.D.
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.8
-0.1
N.D.
N.D.
stress
KB with Avocadyne 10 mM
N.D.
-0.5
-0.4
N.D.
N.D.
stress
KB with Piperic 10 mM
N.D.
-0.3
-0.6
N.D.
N.D.
stress
KB with Cotarnine Chloride 10 mM
N.D.
-0.4
-0.4
N.D.
N.D.
stress
KB with Gossypetin 10 mM
N.D.
+0.0
-0.8
N.D.
N.D.
stress
KB with Acridine orange 3.125 ug/ml
N.D.
-0.2
-0.6
N.D.
N.D.
stress
KB with Chaulmoogric 10 mM
N.D.
+0.0
-0.7
N.D.
N.D.
stress
KB with Hydrastine (1R, 9S) 10 mM
N.D.
-0.4
-0.4
N.D.
N.D.
stress
KB with Erythromycin 6.25 ug/ml
N.D.
+0.2
-0.9
N.D.
N.D.
stress
KB with Biochanin a diacetate 10 mM
N.D.
-0.3
-0.4
N.D.
N.D.
stress
KB with Piperacillin 0.775 ug/ml
N.D.
+0.1
-0.8
N.D.
N.D.
in planta
apoplastic; Green bean; 6 days
N.D.
+0.3
-0.9
N.D.
N.D.
stress
KB with Mitomycin C 0.05 ug/ml
N.D.
+0.4
-0.9
N.D.
N.D.
in planta
apoplastic; Green bean; 6 days
N.D.
+0.4
-0.8
N.D.
N.D.
stress
KB with Nalidixic 0.775 ug/ml
N.D.
+0.3
-0.5
N.D.
N.D.
stress
KB with Nonanoic 10 mM
N.D.
-0.4
+0.3
N.D.
N.D.
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.5
+0.6
N.D.
N.D.
stress
KB with Harmine 10 mM
N.D.
+0.6
-0.3
N.D.
N.D.
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
-0.5
+1.0
N.D.
N.D.
stress
KB with Novobiocin 7.75 ug/ml
N.D.
+0.6
+0.3
N.D.
N.D.
in planta
Green bean; epiphytic
N.D.
+0.9
+0.1
N.D.
N.D.
in planta
Green bean; epiphytic
N.D.
+0.8
+0.2
N.D.
N.D.
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