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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3164 and Psyr_RNA47 are separated by 121 nucleotides
Psyr_RNA47 and Psyr_3165 are separated by 142 nucleotides
Psyr_3165 and Psyr_3166 overlap by 15 nucleotides
Psyr_3166 and Psyr_3167 are separated by 16 nucleotides
Psyr_3164: Psyr_3164 - Protein of unknown function UPF0005, at 3,793,117 to 3,793,788
_3164
Psyr_RNA47: Psyr_RNA47 - tRNA-Ser, at 3,793,910 to 3,793,997
_RNA47
Psyr_3165: Psyr_3165 - transcriptional regulator, LysR family, at 3,794,140 to 3,795,048
_3165
Psyr_3166: Psyr_3166 - ABC transporter, periplasmic substrate-binding protein, putative, at 3,795,034 to 3,795,813
_3166
Psyr_3167: Psyr_3167 - Citrate-proton symport, at 3,795,830 to 3,797,131
_3167
Group
Condition
Psyr
_3164
Psyr
_RNA47
Psyr
_3165
Psyr
_3166
Psyr
_3167
stress
KB with Harmol Hydrochloride 10 mM
-0.4
N.D.
+0.2
-0.5
-0.2
stress
KB with Acridine orange 3.125 ug/ml
-0.3
N.D.
-0.6
-0.1
+0.3
stress
KB with Mitomycin C 0.05 ug/ml
-0.4
N.D.
-0.5
+0.3
-0.0
stress
KB with Acriflavine 1.25 ug/ml
-0.4
N.D.
-0.2
+0.2
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.1
N.D.
-0.1
-0.5
+0.2
stress
KB with 4-hydroxychalcone 10 mM
-0.3
N.D.
+0.1
-0.5
+0.2
stress
KB with Escin 10 mM
-0.6
N.D.
-0.2
+0.3
+0.1
stress
KB with Cantharidin 10 mM
-0.6
N.D.
-0.0
+0.3
-0.0
stress
KB with Piperine 10 mM
-0.8
N.D.
+0.3
-0.2
+0.3
stress
KB with Levodopa 10 mM
-0.4
N.D.
+0.3
-0.2
+0.0
stress
KB with Avocadyne 10 mM
-0.5
N.D.
+0.2
-0.2
+0.2
stress
KB with Oxedrine 10 mM
-0.6
N.D.
-0.1
+0.4
+0.2
stress
KB with Avocatin A 10 mM
-0.2
N.D.
+0.2
-0.4
+0.3
stress
KB with Usnic Acid 10 mM
-0.6
N.D.
+0.1
+0.4
+0.1
stress
KB with Helenine 10 mM
-0.2
N.D.
+0.3
-0.2
+0.2
stress
KB with 4-acetoxyphenol 10 mM
+0.1
N.D.
+0.6
-0.5
-0.1
stress
KB with Harmol 10 mM
-0.3
N.D.
+0.5
-0.2
+0.2
stress
KB with Emodin 10 mM
-0.3
N.D.
+0.3
-0.2
+0.3
kb
KB
-0.3
N.D.
+0.3
-0.0
+0.3
stress
KB with Lawsone 10 mM
-0.3
N.D.
+0.4
-0.2
+0.4
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.3
N.D.
-0.0
+0.6
+0.1
stress
KB with capsaicin 0.125 mg/ml
-0.2
N.D.
+0.2
+0.3
+0.2
stress
KB with Flavone 0.125 mg/ml
-0.2
N.D.
+0.2
+0.5
+0.2
kb
KB
-0.2
N.D.
-0.1
+0.8
+0.1
stress
KB with Rotenone 0.25 mg/ml
-0.1
N.D.
+0.4
+0.4
+0.1
stress
KB with Rotenone 0.125 mg/ml
-0.1
N.D.
+0.2
+0.6
+0.2
in planta
Green bean; epiphytic
+0.2
N.D.
+0.2
+0.4
+0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
N.D.
+0.4
+0.5
+0.1
stress
KB with capsaicin 0.25 mg/ml
+0.2
N.D.
+0.2
+0.6
+0.2
in planta
Green bean; epiphytic
-0.1
N.D.
+0.5
+0.7
+0.2
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