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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3162 and Psyr_3163 are separated by 134 nucleotides
Psyr_3163 and Psyr_3164 are separated by 483 nucleotides
Psyr_3164 and Psyr_RNA47 are separated by 121 nucleotides
Psyr_RNA47 and Psyr_3165 are separated by 142 nucleotides
Psyr_3162: Psyr_3162 - Metalloprotease inhibitor/calysin, at 3,790,763 to 3,791,068
_3162
Psyr_3163: Psyr_3163 - epralysin, Metallo peptidase, MEROPS family M10B, at 3,791,203 to 3,792,633
_3163
Psyr_3164: Psyr_3164 - Protein of unknown function UPF0005, at 3,793,117 to 3,793,788
_3164
Psyr_RNA47: Psyr_RNA47 - tRNA-Ser, at 3,793,910 to 3,793,997
_RNA47
Psyr_3165: Psyr_3165 - transcriptional regulator, LysR family, at 3,794,140 to 3,795,048
_3165
Group
Condition
Psyr
_3162
Psyr
_3163
Psyr
_3164
Psyr
_RNA47
Psyr
_3165
kb
KB
-1.6
+0.1
-0.2
N.D.
-0.1
stress
KB with Oxedrine 10 mM
-0.5
-0.1
-0.6
N.D.
-0.1
stress
KB with Lupeol 10 mM
-1.0
-0.2
-0.2
N.D.
+0.1
stress
KB with Acriflavine 1.25 ug/ml
-0.8
+0.1
-0.4
N.D.
-0.2
in planta
apoplastic, chopping recovery; Green bean
-1.0
-0.0
-0.1
N.D.
-0.1
stress
KB with Phloretin 125 ug/ml
-0.8
+0.1
-0.3
N.D.
-0.1
stress
KB with Nalidixic 0.775 ug/ml
-1.1
+0.2
+0.0
N.D.
-0.1
stress
KB with Novobiocin 7.75 ug/ml
-0.7
-0.2
-0.2
N.D.
+0.1
stress
KB with Quercetin 360 ug/ml
-0.7
-0.0
-0.3
N.D.
+0.1
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.6
+0.2
-0.3
N.D.
-0.0
stress
KB with Avocadyne 10 mM
-0.5
+0.1
-0.5
N.D.
+0.2
stress
KB with Tetracycline 0.0015 ug/ml
-0.6
+0.3
-0.1
N.D.
-0.1
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.4
-0.3
-0.5
N.D.
-0.3
stress
KB with Totarol 10 mM
-0.9
-0.0
-0.1
N.D.
+0.4
in planta
Green bean; epiphytic
-1.1
+0.1
+0.2
N.D.
+0.2
stress
KB with Lawsone 10 mM
-0.6
-0.0
-0.3
N.D.
+0.4
stress
KB with 4-acetoxyphenol 10 mM
-1.0
+0.1
+0.1
N.D.
+0.6
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
+0.5
-0.1
-0.5
N.D.
+0.0
stress
KB with Harmol Hydrochloride 10 mM
+0.4
-0.2
-0.4
N.D.
+0.2
stress
KB with Piperine 10 mM
+0.3
+0.2
-0.8
N.D.
+0.3
stress
KB with Usnic Acid 10 mM
+0.9
-0.1
-0.6
N.D.
+0.1
stress
KB with Gossypol-Acetic Acid Complex 10 mM
+1.0
-0.2
-0.2
N.D.
-0.2
stress
KB with Harmol 10 mM
+0.2
+0.2
-0.3
N.D.
+0.5
stress
KB with Cotarnine Chloride 10 mM
+0.7
-0.0
-0.3
N.D.
+0.2
stress
KB with Isosafrole 10 mM
+1.1
+0.0
-0.3
N.D.
+0.0
stress
KB with Piperic 10 mM
+0.6
+0.2
-0.2
N.D.
+0.3
in planta
apoplastic; Green bean; 6 days
+0.3
+0.2
+0.2
N.D.
+0.4
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.6
+0.2
-0.1
N.D.
+0.4
stress
KB with Mitomycin C 0.05 ug/ml
+5.1
+0.1
-0.4
N.D.
-0.5
stress
KB with Acridine orange 3.125 ug/ml
+5.5
+0.2
-0.3
N.D.
-0.6
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