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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3123 and Psyr_3124 are separated by 110 nucleotides
Psyr_3124 and Psyr_3125 are separated by 186 nucleotides
Psyr_3125 and Psyr_3126 are separated by 141 nucleotides
Psyr_3126 and Psyr_3127 are separated by 86 nucleotides
Psyr_3123: Psyr_3123 - type III effector HopAH2, at 3,744,235 to 3,745,377
_3123
Psyr_3124: Psyr_3124 - TonB-dependent siderophore receptor, at 3,745,488 to 3,747,620
_3124
Psyr_3125: Psyr_3125 - Nicotinamidase, at 3,747,807 to 3,748,451
_3125
Psyr_3126: Psyr_3126 - transporter, putative, at 3,748,593 to 3,749,528
_3126
Psyr_3127: Psyr_3127 - Response regulator receiver:Transcriptional regulatory protein, C-terminal, at 3,749,615 to 3,750,298
_3127
Group
Condition
Psyr
_3123
Psyr
_3124
Psyr
_3125
Psyr
_3126
Psyr
_3127
stress
KB with Mitomycin C 0.05 ug/ml
-0.4
-0.3
-0.1
-0.1
-1.2
stress
KB with Acridine orange 3.125 ug/ml
-0.1
-0.1
-0.7
+0.1
-1.1
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.0
-0.1
-0.5
-0.8
stress
KB with Terpene 10 mM
-0.0
-0.2
-0.6
-0.4
-0.2
stress
KB with 4-acetoxyphenol 10 mM
-0.2
+0.0
-0.5
-0.5
-0.1
stress
KB with Lawsone 10 mM
+0.0
-0.2
-0.3
-0.4
-0.4
stress
KB with Totarol 10 mM
+0.1
-0.0
-0.3
-0.0
-1.1
stress
KB with Phloretin 125 ug/ml
-0.2
-0.3
-0.4
-0.0
-0.4
stress
KB with 4-hydroxychalcone 10 mM
-0.0
+0.0
-0.3
-0.1
-0.8
stress
KB with Auraptene 10 mM
-0.2
-0.1
-0.3
-0.2
-0.5
stress
KB with Biochanin a diacetate 10 mM
-0.2
+0.0
-0.5
-0.5
+0.0
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.2
-0.4
-0.1
+0.1
-0.5
stress
KB with Strychnine Sulfate 10 mM
-0.1
+0.0
-0.1
-0.4
-0.6
stress
KB with Isosafrole 10 mM
+0.0
+0.2
-0.4
-0.0
-0.9
stress
KB with Cantharidin 10 mM
-0.1
+0.1
-0.2
-0.3
-0.6
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.1
+0.1
+0.2
-0.3
-1.0
in planta
epiphytic; Lima bean
-0.1
+0.1
-0.6
-0.1
-0.3
stress
KB with Usnic Acid 10 mM
-0.1
+0.0
+0.1
-0.1
-1.0
stress
KB with Anabasine Hydrochloride 10 mM
-0.1
+0.1
-0.2
-0.2
-0.6
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.1
+0.0
-0.3
-0.3
-0.5
stress
KB with Erythromycin 6.25 ug/ml
+0.0
-0.2
+0.2
-0.1
-0.8
in planta
apoplastic, chopping recovery; Green bean
-0.0
+0.1
+0.1
-0.4
-0.7
in planta
epiphytic; Lima bean
-0.3
-0.1
+0.5
-0.5
-0.4
stress
KB with Dimethyl Sulfoxide 0.42 vol%
+0.1
-0.3
+0.3
-0.1
-0.6
in planta
apoplastic, chopping recovery; Green bean
-0.1
+0.1
+0.4
-0.2
-0.5
stress
KB with Harmine 10 mM
+0.1
-0.3
+0.3
+0.1
-0.5
stress
KB with Oxedrine 10 mM
+0.0
+0.3
+0.3
-0.1
-0.8
in planta
apoplastic, chopping recovery; Green bean
+0.0
+0.1
+0.5
-0.5
-0.3
stress
KB with capsaicin 0.25 mg/ml
+0.1
+0.1
+0.5
-0.2
-0.4
stress
KB with Harmol 10 mM
-0.2
-0.1
+0.5
-0.2
+0.4
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