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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3070 and Psyr_3071 overlap by 17 nucleotides
Psyr_3071 and Psyr_3072 overlap by 4 nucleotides
Psyr_3072 and Psyr_3073 are separated by 278 nucleotides
Psyr_3073 and Psyr_3074 are separated by 322 nucleotides
Psyr_3070: Psyr_3070 - Dimethylmenaquinone methyltransferase, at 3,669,576 to 3,670,295
_3070
Psyr_3071: Psyr_3071 - 3-isopropylmalate dehydrogenase, at 3,670,279 to 3,671,469
_3071
Psyr_3072: Psyr_3072 - HMG-CoA lyase-like protein, at 3,671,466 to 3,672,494
_3072
Psyr_3073: Psyr_3073 - transcriptional regulator, LysR family, at 3,672,773 to 3,673,684
_3073
Psyr_3074: Psyr_3074 - Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein, at 3,674,007 to 3,676,574
_3074
Group
Condition
Psyr
_3070
Psyr
_3071
Psyr
_3072
Psyr
_3073
Psyr
_3074
stress
KB with Veratrine 10 mM
-0.2
-0.2
-0.0
-0.5
-0.5
stress
KB with Physcion 10 mM
-0.3
+0.1
-0.2
-0.4
-0.3
stress
KB with Gossypetin 10 mM
-0.4
-0.1
+0.0
-0.3
-0.2
stress
KB with Sclareolide 10 mM
-0.2
-0.1
-0.1
-0.3
-0.3
stress
KB with Acridine orange 3.125 ug/ml
-0.3
-0.1
+0.1
-0.2
-0.4
stress
KB with Escin 10 mM
-0.1
+0.1
+0.0
-0.3
-0.5
stress
KB with Chaulmoogric 10 mM
-0.5
-0.1
+0.1
-0.0
-0.3
stress
KB with Erythromycin 6.25 ug/ml
+0.1
+0.1
-0.2
-0.1
-0.7
stress
KB with Conessine 10 mM
-0.3
+0.1
-0.1
-0.2
-0.3
stress
KB with Auraptene 10 mM
-0.5
-0.1
+0.2
-0.2
-0.2
stress
KB with Methanol 5 vol%
-0.1
-0.0
+0.2
-0.4
-0.3
stress
KB with Dimethyl Sulfoxide 0.42 vol%
+0.1
+0.1
-0.2
-0.2
-0.4
kb
KB
+0.1
-0.2
+0.1
-0.1
-0.5
stress
KB with Cantharidin 10 mM
+0.1
-0.1
+0.1
-0.3
-0.4
stress
KB with Mitomycin C 0.05 ug/ml
-0.2
+0.2
+0.3
-0.1
-0.6
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.1
-0.0
+0.1
-0.3
-0.4
stress
KB with Nitrofurantoin 31.25 ug/ml
+0.2
-0.1
-0.1
-0.2
-0.3
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.1
+0.1
+0.1
-0.3
-0.3
stress
KB with Anabasine Hydrochloride 10 mM
+0.1
+0.0
+0.1
-0.4
-0.4
stress
KB with Strychnine Sulfate 10 mM
+0.1
-0.0
+0.2
-0.4
-0.4
stress
KB with Quercetin 360 ug/ml
+0.2
+0.0
+0.2
-0.5
-0.3
stress
KB with Oxedrine 10 mM
+0.2
+0.2
+0.1
-0.3
-0.4
stress
KB with Piperic 10 mM
+0.1
+0.1
+0.2
-0.3
-0.3
stress
KB with Ampicillin 0.775 ug/ml
+0.3
-0.1
+0.1
+0.1
-0.3
stress
KB with Piperacillin 0.775 ug/ml
+0.3
+0.2
+0.2
-0.1
-0.5
kb
KB
+0.4
+0.3
-0.1
+0.1
-0.4
stress
KB with Piperine 10 mM
+0.2
+0.2
+0.1
+0.2
-0.4
in planta
epiphytic; Lima bean
-0.3
+0.3
+0.2
+0.3
-0.3
stress
KB with Harmol 10 mM
-0.1
-0.1
+0.4
+0.3
-0.2
stress
KB with Harmine 10 mM
+0.4
+0.2
+0.1
-0.0
-0.2
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