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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3069 and Psyr_3070 are separated by 22 nucleotides
Psyr_3070 and Psyr_3071 overlap by 17 nucleotides
Psyr_3071 and Psyr_3072 overlap by 4 nucleotides
Psyr_3072 and Psyr_3073 are separated by 278 nucleotides
Psyr_3069: Psyr_3069 - conserved hypothetical protein, at 3,669,179 to 3,669,553
_3069
Psyr_3070: Psyr_3070 - Dimethylmenaquinone methyltransferase, at 3,669,576 to 3,670,295
_3070
Psyr_3071: Psyr_3071 - 3-isopropylmalate dehydrogenase, at 3,670,279 to 3,671,469
_3071
Psyr_3072: Psyr_3072 - HMG-CoA lyase-like protein, at 3,671,466 to 3,672,494
_3072
Psyr_3073: Psyr_3073 - transcriptional regulator, LysR family, at 3,672,773 to 3,673,684
_3073
Group
Condition
Psyr
_3069
Psyr
_3070
Psyr
_3071
Psyr
_3072
Psyr
_3073
stress
KB with Veratrine 10 mM
-0.3
-0.2
-0.2
-0.0
-0.5
stress
KB with Sclareolide 10 mM
-0.4
-0.2
-0.1
-0.1
-0.3
stress
KB with Physcion 10 mM
-0.3
-0.3
+0.1
-0.2
-0.4
stress
KB with Gossypetin 10 mM
-0.3
-0.4
-0.1
+0.0
-0.3
stress
KB with Chaulmoogric 10 mM
-0.5
-0.5
-0.1
+0.1
-0.0
stress
KB with Lupeol 10 mM
-0.4
-0.4
-0.2
+0.0
-0.1
stress
KB with Lawsone 10 mM
-0.4
-0.1
-0.1
+0.1
-0.2
stress
KB with 4-hydroxychalcone 10 mM
-0.4
-0.5
+0.0
+0.0
+0.1
stress
KB with Auraptene 10 mM
-0.2
-0.5
-0.1
+0.2
-0.2
stress
KB with Levodopa 10 mM
-0.6
-0.1
-0.1
+0.1
-0.0
stress
KB with Diallyl sulfide 10 mM
-0.5
-0.1
-0.1
+0.1
-0.1
stress
KB with L-alliin 10 mM
-0.6
-0.1
-0.1
+0.2
-0.0
stress
KB with Conessine 10 mM
-0.1
-0.3
+0.1
-0.1
-0.2
stress
KB with Palmatine 10 mM
-0.5
-0.3
-0.0
+0.1
+0.1
kb
KB
-0.4
+0.1
-0.2
+0.1
-0.1
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.2
-0.1
+0.1
+0.1
-0.3
stress
KB with Strychnine Sulfate 10 mM
-0.3
+0.1
-0.0
+0.2
-0.4
stress
KB with Piperic 10 mM
-0.3
+0.1
+0.1
+0.2
-0.3
stress
KB with Methanol 5 vol%
+0.2
-0.1
-0.0
+0.2
-0.4
stress
KB with Chrysophanol 10 mM
-0.4
-0.1
-0.0
+0.2
+0.2
stress
KB with Cotarnine Chloride 10 mM
-0.4
+0.3
+0.0
+0.0
-0.0
stress
KB with Piperine 10 mM
-0.5
+0.2
+0.2
+0.1
+0.2
stress
KB with Quercetin 360 ug/ml
+0.3
+0.2
+0.0
+0.2
-0.5
stress
KB with Berberine 15.6 ug/ml
+0.2
+0.2
-0.2
-0.1
+0.1
stress
KB with Oxedrine 10 mM
+0.3
+0.2
+0.2
+0.1
-0.3
stress
KB with Harmol 10 mM
-0.1
-0.1
-0.1
+0.4
+0.3
kb
KB
-0.1
+0.4
+0.3
-0.1
+0.1
in planta
epiphytic; Lima bean
+0.0
-0.3
+0.3
+0.2
+0.3
stress
KB with Mitomycin C 0.05 ug/ml
+0.6
-0.2
+0.2
+0.3
-0.1
stress
KB with Harmine 10 mM
+0.3
+0.4
+0.2
+0.1
-0.0
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