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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3067 and Psyr_3068 are separated by 85 nucleotides
Psyr_3068 and Psyr_3069 are separated by 77 nucleotides
Psyr_3069 and Psyr_3070 are separated by 22 nucleotides
Psyr_3070 and Psyr_3071 overlap by 17 nucleotides
Psyr_3067: Psyr_3067 - conserved hypothetical protein, at 3,667,265 to 3,668,044
_3067
Psyr_3068: Psyr_3068 - 2-nitropropane dioxygenase, NPD, at 3,668,130 to 3,669,101
_3068
Psyr_3069: Psyr_3069 - conserved hypothetical protein, at 3,669,179 to 3,669,553
_3069
Psyr_3070: Psyr_3070 - Dimethylmenaquinone methyltransferase, at 3,669,576 to 3,670,295
_3070
Psyr_3071: Psyr_3071 - 3-isopropylmalate dehydrogenase, at 3,670,279 to 3,671,469
_3071
Group
Condition
Psyr
_3067
Psyr
_3068
Psyr
_3069
Psyr
_3070
Psyr
_3071
stress
KB with Chaulmoogric 10 mM
-0.3
-0.1
-0.5
-0.5
-0.1
stress
KB with Veratrine 10 mM
-0.4
-0.1
-0.3
-0.2
-0.2
stress
KB with L-alliin 10 mM
-0.2
-0.1
-0.6
-0.1
-0.1
stress
KB with Palmatine 10 mM
-0.5
+0.1
-0.5
-0.3
-0.0
stress
KB with Lupeol 10 mM
-0.1
-0.0
-0.4
-0.4
-0.2
stress
KB with Gossypetin 10 mM
-0.3
+0.0
-0.3
-0.4
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.3
-0.3
-0.2
-0.0
-0.1
stress
KB with 4-hydroxychalcone 10 mM
-0.3
+0.3
-0.4
-0.5
+0.0
stress
KB with Auraptene 10 mM
-0.1
+0.1
-0.2
-0.5
-0.1
kb
KB
-0.1
-0.1
-0.4
+0.1
-0.2
stress
KB with Lawsone 10 mM
-0.2
+0.2
-0.4
-0.1
-0.1
stress
KB with Physcion 10 mM
-0.2
+0.0
-0.3
-0.3
+0.1
stress
KB with Diallyl sulfide 10 mM
-0.2
+0.3
-0.5
-0.1
-0.1
stress
KB with Palmatine chloride 10 mM
-0.2
+0.3
-0.2
-0.5
+0.0
stress
KB with Sclareolide 10 mM
-0.1
+0.3
-0.4
-0.2
-0.1
stress
KB with Levodopa 10 mM
+0.0
+0.3
-0.6
-0.1
-0.1
stress
KB with d-limonene 10 mM
-0.2
+0.3
-0.3
-0.2
-0.1
stress
KB with 4-acetoxyphenol 10 mM
-0.3
+0.3
-0.1
-0.2
-0.1
stress
KB with Nonanoic 10 mM
-0.2
+0.4
-0.4
-0.1
+0.0
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
+0.3
-0.3
-0.1
-0.1
+0.1
kb
KB
+0.1
-0.4
-0.1
+0.2
+0.0
in planta
epiphytic; Lima bean
+0.2
-0.2
+0.0
-0.3
+0.3
stress
KB with Paclitaxel 10 mM
-0.0
+0.6
-0.3
-0.2
-0.1
stress
KB with Terpene 10 mM
-0.2
+0.4
-0.0
-0.3
+0.1
stress
KB with Piperacillin 0.775 ug/ml
-0.2
-0.4
+0.1
+0.3
+0.2
stress
KB with Piperine 10 mM
-0.2
+0.5
-0.5
+0.2
+0.2
stress
KB with Mitomycin C 0.05 ug/ml
-0.0
-0.3
+0.6
-0.2
+0.2
stress
KB with Carbenicillin 3.1 ug/ml
+0.1
+0.4
+0.0
-0.3
+0.2
stress
KB with Harmine 10 mM
+0.2
-0.5
+0.3
+0.4
+0.2
kb
KB
-0.0
+0.3
-0.1
+0.4
+0.3
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