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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3001 and Psyr_3002 are separated by 9 nucleotides
Psyr_3002 and Psyr_3003 are separated by 376 nucleotides
Psyr_3003 and Psyr_3004 are separated by 74 nucleotides
Psyr_3004 and Psyr_3005 are separated by 80 nucleotides
Psyr_3001: Psyr_3001 - Glycosyl transferase, family 2, at 3,597,093 to 3,597,746
_3001
Psyr_3002: Psyr_3002 - conserved hypothetical protein, at 3,597,756 to 3,598,796
_3002
Psyr_3003: Psyr_3003 - [Acyl-carrier protein] phosphodiesterase, at 3,599,173 to 3,599,781
_3003
Psyr_3004: Psyr_3004 - transcriptional regulator, LysR family, at 3,599,856 to 3,600,815
_3004
Psyr_3005: Psyr_3005 - 3-oxoadipate enol-lactonase, at 3,600,896 to 3,601,687
_3005
Group
Condition
Psyr
_3001
Psyr
_3002
Psyr
_3003
Psyr
_3004
Psyr
_3005
stress
KB with Auraptene 10 mM
+0.1
-0.4
-0.1
+0.3
-1.5
in planta
epiphytic; Lima bean
-0.2
-0.6
+0.6
-0.2
-1.0
stress
KB with Chrysophanol 10 mM
-0.6
-0.5
+0.4
+0.3
-0.2
stress
KB with Escin 10 mM
+0.3
+0.2
-0.2
-0.0
-0.8
stress
KB with Cotarnine Chloride 10 mM
-0.2
+0.3
-0.3
-0.5
+0.2
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.0
+0.3
+0.2
-0.4
-0.5
in planta
Green bean; epiphytic
-0.5
+0.0
-0.1
+0.6
-0.2
in planta
epiphytic; Lima bean
-0.5
+0.5
+0.6
-0.8
-0.1
stress
KB with Sclareolide 10 mM
+0.4
-0.3
+0.2
+0.1
-0.5
stress
KB with Chaulmoogric 10 mM
+0.0
-0.4
+0.5
-0.3
+0.3
stress
KB with Avocadyne 10 mM
+0.5
-0.2
+0.2
+0.2
-0.6
stress
KB with Veratrine 10 mM
+0.1
-0.5
+0.5
+0.2
-0.2
stress
KB with Curcumin 10 mM
+0.6
-0.5
+0.3
-0.2
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.3
+0.4
+0.3
+0.5
-0.4
stress
KB with Piperine 10 mM
+0.4
-0.2
+0.1
-0.4
+0.5
stress
KB with Novobiocin 7.75 ug/ml
+0.6
+0.2
+0.1
-0.5
+0.1
stress
KB with Quercetin 360 ug/ml
+0.5
+0.2
+0.4
-0.6
+0.0
stress
KB with Palmatine 10 mM
+0.0
+0.0
+0.7
+0.4
-0.4
stress
KB with Acridine orange 3.125 ug/ml
+0.1
+0.9
+0.3
-0.1
-0.6
stress
KB with Harmol 10 mM
+0.1
-0.4
+0.5
+0.3
+0.3
stress
KB with Gossypetin 10 mM
-0.0
-0.1
+0.3
+0.3
+0.7
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.5
+0.8
+1.0
-0.9
stress
KB with Levodopa 10 mM
+0.3
-0.2
+0.2
+0.4
+0.6
in planta
apoplastic, chopping recovery; Green bean
+0.1
+0.6
+0.9
+0.5
-0.5
stress
KB with Totarol 10 mM
+0.3
-0.2
+0.7
+0.3
+0.4
stress
KB with Helenine 10 mM
+0.4
-0.1
+0.5
+0.1
+0.8
in planta
apoplastic, chopping recovery; Green bean
-0.1
+0.5
+0.7
+0.8
-0.1
stress
KB with Isosafrole 10 mM
+0.2
+0.4
+0.0
+0.2
+1.0
stress
KB with 4-acetoxyphenol 10 mM
+0.4
-0.1
+0.5
+0.4
+0.7
stress
KB with Mitomycin C 0.05 ug/ml
+0.2
+1.3
+4.6
-0.4
+0.2
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