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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
1
2
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4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2902 and Psyr_2903 are separated by 0 nucleotides
Psyr_2903 and Psyr_2904 overlap by 4 nucleotides
Psyr_2904 and Psyr_2905 are separated by 1 nucleotides
Psyr_2905 and Psyr_2906 are separated by 48 nucleotides
Psyr_2902: Psyr_2902 - extracellular solute-binding protein, family 5, at 3,480,244 to 3,482,112
_2902
Psyr_2903: Psyr_2903 - Binding-protein-dependent transport systems inner membrane component, at 3,482,113 to 3,483,177
_2903
Psyr_2904: Psyr_2904 - Binding-protein-dependent transport systems inner membrane component, at 3,483,174 to 3,484,199
_2904
Psyr_2905: Psyr_2905 - ABC transporter, at 3,484,201 to 3,485,778
_2905
Psyr_2906: Psyr_2906 - Pilus retraction protein PilT, at 3,485,827 to 3,486,996
_2906
Group
Condition
Psyr
_2902
Psyr
_2903
Psyr
_2904
Psyr
_2905
Psyr
_2906
stress
KB with Novobiocin 7.75 ug/ml
-0.3
-0.3
-0.5
-0.3
-0.9
in planta
apoplastic, chopping recovery; Green bean
-0.2
-0.2
+0.3
+0.0
-2.1
in planta
epiphytic; Lima bean
+0.2
+0.2
-0.2
+0.2
-1.8
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.0
-0.3
-0.4
+0.2
-0.8
in planta
apoplastic, chopping recovery; Green bean
-0.0
+0.1
-0.0
-0.2
-1.1
in planta
apoplastic, chopping recovery; Green bean
-0.3
+0.1
+0.3
+0.0
-1.1
in planta
apoplastic; Green bean; 6 days
+0.3
+0.1
-0.2
-0.6
-0.4
stress
KB with Oxedrine 10 mM
-0.3
-0.2
-0.6
+0.5
+0.0
stress
KB with Erythromycin 6.25 ug/ml
+0.1
+0.3
-0.3
-0.5
-0.1
stress
KB with Carbenicillin 3.1 ug/ml
+0.3
-0.1
+0.1
+0.1
-0.8
stress
KB with Emodin 10 mM
-0.1
-0.2
+0.3
+0.4
-0.7
stress
KB with Avocadyne 10 mM
-0.0
+0.4
-0.1
+0.4
-0.7
stress
KB with Harmol 10 mM
+0.0
+0.5
-0.3
-0.4
+0.2
stress
KB with Tetracycline 0.0015 ug/ml
+0.1
+0.1
-0.1
-0.4
+0.4
stress
KB with Mitomycin C 0.05 ug/ml
-0.2
-0.2
-0.3
-0.2
+1.1
stress
KB with Escin 10 mM
-0.2
-0.4
-0.1
+0.2
+0.9
stress
KB with Veratrine 10 mM
-0.1
+0.1
+0.3
+0.4
-0.4
in planta
apoplastic; Green bean; 6 days
+0.1
+0.2
-0.1
-0.3
+0.6
stress
KB with Anethole 10 mM
-0.3
+0.4
+0.2
+0.4
-0.1
in planta
epiphytic; Lima bean
+0.3
-0.1
-0.5
+0.2
+0.7
stress
KB with Chrysophanol 10 mM
-0.2
+0.2
-0.2
+0.3
+0.5
stress
KB with Lupeol 10 mM
+0.0
+0.1
+0.4
+0.6
-0.2
stress
KB with Conessine 10 mM
+0.1
+0.3
+0.4
+0.3
-0.3
stress
KB with Diallyl sulfide 10 mM
-0.1
+0.0
+0.3
-0.0
+0.9
stress
KB with Gossypetin 10 mM
-0.1
+0.3
+0.2
+0.6
+0.4
stress
KB with d-limonene 10 mM
+0.1
+0.4
+0.6
+0.5
-0.1
stress
KB with L-alliin 10 mM
-0.0
+0.3
+0.3
+0.5
+0.4
stress
KB with Solanesol 10 mM
+0.0
+0.3
+0.7
+0.4
+0.2
in planta
Green bean; epiphytic
+0.3
+0.3
-0.0
+0.3
+0.9
stress
KB with Acridine orange 3.125 ug/ml
-0.0
-0.2
+0.4
+0.4
+1.3
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