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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2882 and Psyr_2883 are separated by 169 nucleotides
Psyr_2883 and Psyr_2884 are separated by 133 nucleotides
Psyr_2884 and Psyr_2885 are separated by 102 nucleotides
Psyr_2885 and Psyr_2886 are separated by 0 nucleotides
Psyr_2882: Psyr_2882 - transcriptional regulator, AraC family, at 3,457,488 to 3,458,687
_2882
Psyr_2883: Psyr_2883 - D-xylose isomerase, at 3,458,857 to 3,460,173
_2883
Psyr_2884: Psyr_2884 - xylose-binding protein, at 3,460,307 to 3,461,308
_2884
Psyr_2885: Psyr_2885 - xylose ABC transporter ATP-binding protein, at 3,461,411 to 3,462,967
_2885
Psyr_2886: Psyr_2886 - xylose ABC transporter membrane protein, at 3,462,968 to 3,464,104
_2886
Group
Condition
Psyr
_2882
Psyr
_2883
Psyr
_2884
Psyr
_2885
Psyr
_2886
stress
KB with Novobiocin 7.75 ug/ml
+0.1
-0.1
-0.6
+0.0
-0.4
stress
KB with Escin 10 mM
-0.3
-0.2
-0.1
-0.5
+0.0
stress
KB with Carbenicillin 3.1 ug/ml
+0.2
-0.5
-0.2
-0.2
-0.3
stress
KB with Quercetin 360 ug/ml
+0.2
+0.2
-0.3
-0.1
-0.5
stress
KB with Mitomycin C 0.05 ug/ml
+0.4
-0.4
-0.3
+0.2
+0.0
stress
KB with Gossypetin 10 mM
+0.2
+0.3
+0.0
-0.3
-0.1
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.1
+0.1
-0.5
+0.2
stress
KB with Avocadene 10 mM
-0.2
+0.3
-0.4
+0.4
-0.1
stress
KB with Totarol 10 mM
+0.3
-0.1
-0.3
-0.1
+0.3
stress
KB with Acriflavine 1.25 ug/ml
+0.1
-0.1
-0.3
+0.2
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.1
+0.1
+0.1
-0.5
+0.5
stress
KB with Nitrofurantoin 0.0625 mg/ml
+0.1
+0.2
-0.4
+0.1
+0.2
stress
KB with D-Salicin 240 ug/ml
+0.6
+0.3
-0.0
-0.2
-0.3
in planta
epiphytic; Lima bean
+0.4
-0.2
+0.2
-0.1
+0.1
stress
KB with Palmatine chloride 10 mM
+0.2
-0.2
+0.7
-0.1
-0.2
stress
KB with Chloramphenicol 1.55 ug/ml
-0.0
-0.2
+0.2
+0.2
+0.3
stress
KB with Physcion 10 mM
+0.3
-0.1
+0.2
-0.2
+0.3
in planta
apoplastic, chopping recovery; Green bean
+0.1
+0.1
+0.3
-0.4
+0.5
in planta
apoplastic; Green bean; 6 days
+0.3
+0.4
-0.2
+0.0
+0.1
stress
KB with Paclitaxel 10 mM
+0.2
+0.3
-0.0
-0.1
+0.3
stress
KB with Sinomenine 10 mM
+0.3
+0.4
-0.1
-0.1
+0.2
stress
KB with Auraptene 10 mM
+0.3
-0.1
+0.3
-0.1
+0.2
in planta
apoplastic; Green bean; 6 days
+0.1
+0.3
+0.1
-0.1
+0.3
stress
KB with Nalidixic 0.775 ug/ml
+0.4
+0.2
+0.1
+0.1
+0.0
in planta
epiphytic; Lima bean
+0.2
-0.1
+0.3
+0.2
+0.4
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
+0.3
+0.1
+0.1
+0.3
+0.2
stress
KB with Strychnine Sulfate 10 mM
+0.6
+0.2
-0.4
+0.3
+0.2
stress
KB with Usnic Acid 10 mM
+0.1
+0.3
+0.1
+0.2
+0.3
stress
KB with Acridine orange 3.125 ug/ml
+0.5
-0.0
+0.5
+0.0
+0.2
stress
KB with Harmol 10 mM
+0.6
+0.1
+0.4
+0.0
+0.2
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