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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2880 and Psyr_2881 are separated by 354 nucleotides
Psyr_2881 and Psyr_2882 are separated by 5 nucleotides
Psyr_2882 and Psyr_2883 are separated by 169 nucleotides
Psyr_2883 and Psyr_2884 are separated by 133 nucleotides
Psyr_2880: Psyr_2880 - conserved hypothetical protein, at 3,455,911 to 3,456,360
_2880
Psyr_2881: Psyr_2881 - xylellain, Cysteine peptidase, MEROPS family C01A, at 3,456,715 to 3,457,482
_2881
Psyr_2882: Psyr_2882 - transcriptional regulator, AraC family, at 3,457,488 to 3,458,687
_2882
Psyr_2883: Psyr_2883 - D-xylose isomerase, at 3,458,857 to 3,460,173
_2883
Psyr_2884: Psyr_2884 - xylose-binding protein, at 3,460,307 to 3,461,308
_2884
Group
Condition
Psyr
_2880
Psyr
_2881
Psyr
_2882
Psyr
_2883
Psyr
_2884
stress
KB with Novobiocin 7.75 ug/ml
-1.0
-0.7
+0.1
-0.1
-0.6
stress
KB with Quercetin 360 ug/ml
-1.2
-0.3
+0.2
+0.2
-0.3
stress
KB with Palmatine 10 mM
-0.1
-0.8
-0.2
-0.1
-0.4
stress
KB with Mitomycin C 0.05 ug/ml
-0.7
-0.4
+0.4
-0.4
-0.3
in planta
apoplastic, chopping recovery; Green bean
-0.7
-0.7
-0.2
-0.0
+0.3
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.6
-0.1
+0.0
+0.2
-0.4
in planta
apoplastic, chopping recovery; Green bean
-0.5
-0.8
+0.2
+0.1
+0.1
stress
KB with Avocadene 10 mM
-0.3
-0.3
-0.2
+0.3
-0.4
stress
KB with Rotenone 0.125 mg/ml
-0.5
-0.4
-0.1
+0.2
-0.1
stress
KB with Veratrine 10 mM
-0.7
-0.4
+0.4
-0.0
+0.1
stress
KB with Acridine orange 3.125 ug/ml
-0.7
-0.8
+0.5
-0.0
+0.5
stress
KB with Acriflavine 1.25 ug/ml
-0.4
+0.3
+0.1
-0.1
-0.3
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.8
+0.2
-0.0
-0.1
+0.2
stress
KB with Tetracycline 0.0015 ug/ml
-1.0
+0.3
+0.0
+0.2
+0.1
stress
KB with D-Salicin 240 ug/ml
-0.8
-0.3
+0.6
+0.3
-0.0
stress
KB with Phloretin 125 ug/ml
-0.8
+0.4
-0.0
-0.0
+0.2
stress
KB with Nitrofurantoin 31.25 ug/ml
-0.6
+0.3
+0.2
+0.1
-0.2
in planta
epiphytic; Lima bean
-0.2
-0.4
+0.4
-0.2
+0.2
kb
KB
-1.0
+0.5
+0.2
+0.1
+0.1
stress
KB with Erythromycin 6.25 ug/ml
-0.7
+0.3
+0.1
+0.1
+0.1
stress
KB with Nalidixic 0.775 ug/ml
-0.7
-0.0
+0.4
+0.2
+0.1
stress
KB with Strychnine Sulfate 10 mM
-0.2
-0.2
+0.6
+0.2
-0.4
stress
KB with Sinomenine 10 mM
-0.3
-0.2
+0.3
+0.4
-0.1
stress
KB with Harmol 10 mM
-0.6
-0.3
+0.6
+0.1
+0.4
stress
KB with Piperacillin 0.775 ug/ml
-0.8
+0.5
+0.2
+0.1
+0.3
in planta
apoplastic; Green bean; 6 days
+0.5
-0.5
+0.3
+0.4
-0.2
stress
KB with Piperine 10 mM
-0.2
+0.4
-0.1
+0.1
+0.5
stress
KB with Chloramphenicol 1.55 ug/ml
-0.1
+0.7
-0.0
-0.2
+0.2
in planta
apoplastic; Green bean; 6 days
+0.5
-0.3
+0.1
+0.3
+0.1
stress
KB with Palmatine chloride 10 mM
+0.0
+0.2
+0.2
-0.2
+0.7
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