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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2669 and Psyr_2670 are separated by 5 nucleotides
Psyr_2670 and Psyr_2671 are separated by 41 nucleotides
Psyr_2671 and Psyr_2672 are separated by 83 nucleotides
Psyr_2672 and Psyr_2673 are separated by 0 nucleotides
Psyr_2669: Psyr_2669 - Aminoglycoside phosphotransferase, at 3,240,608 to 3,241,411
_2669
Psyr_2670: Psyr_2670 - Aminoglycoside/hydroxyurea antibiotic resistance kinase, at 3,241,417 to 3,242,247
_2670
Psyr_2671: Psyr_2671 - transcriptional regulator, LysR family, at 3,242,289 to 3,243,230
_2671
Psyr_2672: Psyr_2672 - Citrate transporter, at 3,243,314 to 3,244,606
_2672
Psyr_2673: Psyr_2673 - Protein of unknown function DUF1446, at 3,244,607 to 3,245,971
_2673
Group
Condition
Psyr
_2669
Psyr
_2670
Psyr
_2671
Psyr
_2672
Psyr
_2673
stress
KB with Escin 10 mM
N.D.
-0.6
-0.2
-0.0
-0.1
stress
KB with Rotenone 0.25 mg/ml
N.D.
-0.4
-0.2
-0.0
-0.2
stress
KB with Mitomycin C 0.05 ug/ml
N.D.
-0.8
-0.5
+0.4
+0.3
stress
KB with Acridine orange 3.125 ug/ml
N.D.
-0.7
-0.4
+0.2
+0.4
stress
KB with Totarol 10 mM
N.D.
+0.2
-0.3
-0.3
-0.0
stress
KB with Benzalkonium chloride 1.55 ug/ml
N.D.
-0.2
+0.1
+0.2
-0.4
stress
KB with Usnic Acid 10 mM
N.D.
-0.4
-0.2
+0.3
+0.1
stress
KB with Strychnine Sulfate 10 mM
N.D.
-0.4
-0.2
+0.2
+0.3
stress
KB with Harmol 10 mM
N.D.
+0.2
-0.5
+0.1
+0.1
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
N.D.
-0.5
+0.0
+0.2
+0.1
stress
KB with Oxedrine 10 mM
N.D.
-0.4
-0.1
+0.3
+0.1
stress
KB with Isosafrole 10 mM
N.D.
-0.4
-0.2
+0.3
+0.2
stress
KB with d-limonene 10 mM
N.D.
+0.3
-0.1
+0.2
-0.4
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.0
-0.4
+0.0
+0.3
stress
KB with Terpene 10 mM
N.D.
+0.3
-0.3
+0.3
-0.2
stress
KB with Gossypol-Acetic Acid Complex 10 mM
N.D.
-0.1
-0.2
+0.3
+0.2
stress
KB with Piperine 10 mM
N.D.
+0.1
-0.3
+0.3
-0.0
stress
KB with Avocadene 10 mM
N.D.
-0.3
-0.1
+0.2
+0.2
stress
KB with Quercetin 360 ug/ml
N.D.
-0.3
+0.3
+0.4
-0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
+0.1
-0.3
+0.1
+0.3
stress
KB with Hydrastine (1R, 9S) 10 mM
N.D.
+0.3
-0.1
+0.2
-0.2
stress
KB with Piperacillin 0.775 ug/ml
N.D.
-0.2
+0.1
+0.2
+0.3
kb
KB
N.D.
-0.2
+0.2
+0.3
+0.2
stress
KB with Tetracycline 0.0015 ug/ml
N.D.
-0.1
+0.3
+0.3
-0.1
stress
KB with Chloramphenicol 1.55 ug/ml
N.D.
+0.0
-0.2
+0.3
+0.4
stress
KB with Prenyletin 10 mM
N.D.
+0.4
+0.2
+0.1
-0.1
stress
KB with Physcion 10 mM
N.D.
+0.2
-0.1
+0.3
+0.3
in planta
epiphytic; Lima bean
N.D.
+0.4
-0.3
-0.0
+0.6
stress
KB with Levodopa 10 mM
N.D.
+0.5
+0.0
+0.4
-0.2
stress
KB with Lupeol 10 mM
N.D.
+0.2
+0.3
+0.2
+0.1
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