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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2668 and Psyr_2669 are separated by 65 nucleotides
Psyr_2669 and Psyr_2670 are separated by 5 nucleotides
Psyr_2670 and Psyr_2671 are separated by 41 nucleotides
Psyr_2671 and Psyr_2672 are separated by 83 nucleotides
Psyr_2668: Psyr_2668 - Helix-turn-helix, Fis-type, at 3,239,928 to 3,240,542
_2668
Psyr_2669: Psyr_2669 - Aminoglycoside phosphotransferase, at 3,240,608 to 3,241,411
_2669
Psyr_2670: Psyr_2670 - Aminoglycoside/hydroxyurea antibiotic resistance kinase, at 3,241,417 to 3,242,247
_2670
Psyr_2671: Psyr_2671 - transcriptional regulator, LysR family, at 3,242,289 to 3,243,230
_2671
Psyr_2672: Psyr_2672 - Citrate transporter, at 3,243,314 to 3,244,606
_2672
Group
Condition
Psyr
_2668
Psyr
_2669
Psyr
_2670
Psyr
_2671
Psyr
_2672
stress
KB with Acridine orange 3.125 ug/ml
-0.1
N.D.
-0.7
-0.4
+0.2
stress
KB with Escin 10 mM
+0.2
N.D.
-0.6
-0.2
-0.0
stress
KB with Mitomycin C 0.05 ug/ml
+0.5
N.D.
-0.8
-0.5
+0.4
stress
KB with Harmine 10 mM
-0.4
N.D.
-0.2
+0.3
-0.1
stress
KB with Chloramphenicol 1.55 ug/ml
-0.4
N.D.
+0.0
-0.2
+0.3
stress
KB with Oxedrine 10 mM
+0.0
N.D.
-0.4
-0.1
+0.3
stress
KB with Piperine 10 mM
-0.4
N.D.
+0.1
-0.3
+0.3
in planta
epiphytic; Lima bean
+0.3
N.D.
-0.0
-0.5
+0.0
stress
KB with Strychnine Sulfate 10 mM
+0.4
N.D.
-0.4
-0.2
+0.2
stress
KB with Totarol 10 mM
+0.3
N.D.
+0.2
-0.3
-0.3
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.3
N.D.
-0.5
+0.0
+0.2
stress
KB with Usnic Acid 10 mM
+0.4
N.D.
-0.4
-0.2
+0.3
stress
KB with Isosafrole 10 mM
+0.5
N.D.
-0.4
-0.2
+0.3
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
+0.4
N.D.
-0.3
-0.1
+0.3
stress
KB with Harmol 10 mM
+0.5
N.D.
+0.2
-0.5
+0.1
in planta
epiphytic; Lima bean
+0.2
N.D.
+0.4
-0.3
-0.0
stress
KB with Tetracycline 0.0015 ug/ml
-0.2
N.D.
-0.1
+0.3
+0.3
in planta
apoplastic; Green bean; 6 days
+0.6
N.D.
+0.1
-0.2
-0.1
stress
KB with Cantharidin 10 mM
+0.6
N.D.
-0.3
-0.0
+0.2
kb
KB
+0.5
N.D.
+0.0
-0.2
+0.1
stress
KB with Avocatin A 10 mM
+0.4
N.D.
-0.0
+0.3
-0.2
stress
KB with Terpene 10 mM
+0.2
N.D.
+0.3
-0.3
+0.3
stress
KB with Avocadene 10 mM
+0.7
N.D.
-0.3
-0.1
+0.2
stress
KB with Paclitaxel 10 mM
+0.4
N.D.
+0.2
-0.1
+0.2
stress
KB with Veratrine 10 mM
+0.5
N.D.
+0.1
-0.1
+0.2
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.4
N.D.
+0.3
-0.1
+0.2
stress
KB with Oxonitine 10 mM
+0.7
N.D.
-0.2
+0.1
+0.3
stress
KB with 4-acetoxyphenol 10 mM
+0.4
N.D.
+0.1
+0.2
+0.2
stress
KB with Quercetin 360 ug/ml
+0.5
N.D.
-0.3
+0.3
+0.4
stress
KB with Levodopa 10 mM
+0.1
N.D.
+0.5
+0.0
+0.4
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